Gene: ATR_00001G00600 (Amborella trichopoda)

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Gene Identifier
ATR_00001G00600
Transcript Identifier
ATR_00001G00600.1
Gene Type
Coding gene
Location
scaffold00001 : 1005158-1007284 : negative

Family

Gene family
HOM03D000646
(211 genes in 31 species)
specific family
Subfamily
ORTHO03D000137
(153 genes in 31 species)
specific family
Duplication type
Tandem duplicate

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Descriptions

Description (AnnoMine)
desaturase, chloroplastic
Only text-mined description found ...
Description of best ortholog(s):

Identifiers

Identifier Name
GeneNameevm_27.TU.AmTr_v1.0_scaffold00001.60
idevm_27.model.AmTr_v1.0_scaffold00001.60

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Biological Process

GO termEvidence(s)ProviderDescriptionSource
GO:0006631IEAInterProfatty acid metabolic process
GO:0055114IEAInterProoxidation-reduction process
GO:0002213ISOPLAZA Integrative Orthologydefense response to insectAT2G43710
GO:0051607ISOPLAZA Integrative Orthologydefense response to virusAT2G43710
GO:2000031ISOPLAZA Integrative Orthologyregulation of salicylic acid mediated signaling pathwayAT2G43710
GO:0006636ISOPLAZA Integrative Orthologyunsaturated fatty acid biosynthetic processAT2G43710
GO:2000022ISOPLAZA Integrative Orthologyregulation of jasmonic acid mediated signaling pathwayAT2G43710
GO:0042742ISOPLAZA Integrative Orthologydefense response to bacteriumAT2G43710
GO:0008610ISOPLAZA Integrative Orthologylipid biosynthetic processAT2G43710
GO:0009695ISOPLAZA Integrative Orthologyjasmonic acid biosynthetic processAT2G43710
GO:0006952ISOPLAZA Integrative Orthologydefense responseAT2G43710
GO:0006629IEAPLAZA Homologylipid metabolic processHOM03D000646
GO:0043436IEAPLAZA Homologyoxoacid metabolic processHOM03D000646
GO:0032787IEAPLAZA Homologymonocarboxylic acid metabolic processHOM03D000646
GO:0044255IEAPLAZA Homologycellular lipid metabolic processHOM03D000646
GO:0006082IEAPLAZA Homologyorganic acid metabolic processHOM03D000646
GO:0019752IEAPLAZA Homologycarboxylic acid metabolic processHOM03D000646

Molecular Function

GO termEvidence(s)ProviderDescriptionSource
GO:0016491IEAInterProoxidoreductase activity
GO:0045300IEAInterProacyl-[acyl-carrier-protein] desaturase activity
GO:0004768ISOPLAZA Integrative Orthologystearoyl-CoA 9-desaturase activityAT2G43710
GO:0016717IEAPLAZA Homologyoxidoreductase activity, acting on paired donors, with oxidation of a pair of donors resulting in the reduction of molecular oxygen to two molecules of waterHOM03D000646
GO:0016705IEAPLAZA Homologyoxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygenHOM03D000646

Cellular Component

GO termEvidence(s)ProviderDescriptionSource
GO:0009507ISOPLAZA Integrative OrthologychloroplastAT3G02630 AT2G43710
GO:0009536ISOPLAZA Integrative OrthologyplastidAT2G43710
GO:0009570ISOPLAZA Integrative Orthologychloroplast stromaAT3G02630 AT2G43710
GO:0009534ISOPLAZA Integrative Orthologychloroplast thylakoidAT2G43710
GO:0016020ISOPLAZA Integrative OrthologymembraneAT1G43800

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Experimental Evidence
Electronic Evidence
Computational Reviewed Evidence
GO Sources:   Primary     Orthology     Homology  
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InterPro Description
IPR012348Ribonucleotide reductase-related
IPR009078Ferritin-like superfamily
IPR005067Fatty acid desaturase, type 2

No MapMan annotations defined for this gene.
No SignalP domains detected for this gene.