Gene: ATCG00540 (Arabidopsis thaliana)

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Gene Identifier
ATCG00540
Transcript Identifier
ATCG00540.1
Gene Type
Coding gene
Location
chloroplast : 61657-62619 : positive

Family

Gene family
HOM03D002595
(70 genes in 23 species)
specific family
Subfamily
ORTHO03D003550
(37 genes in 23 species)
specific family

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Descriptions

Description
photosynthetic electron transfer A
Curated Summary
Encodes cytochrome f apoprotein; involved in photosynthetic electron transport chain; encoded by the chloroplast genome and is transcriptionally repressed by a nuclear gene HCF2.
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Identifiers

Identifier Name
aliasPETA
aliasphotosynthetic electron transfer A
uniprotP56771

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Biological Process

GO termEvidence(s)ProviderDescriptionSource
GO:0006091RCAGene Ontologygeneration of precursor metabolites and energy1
GO:0006354RCAGene OntologyDNA-dependent transcription, elongation1
GO:0010207RCAGene Ontologyphotosystem II assembly1
GO:0015979IEA, RCAUniProtphotosynthesis1 2
GO:0019684RCAGene Ontologyphotosynthesis, light reaction1
GO:0009767TASGene Ontologyphotosynthetic electron transport chain1
GO:0055114IEAUniProtoxidation-reduction process1

Molecular Function

GO termEvidence(s)ProviderDescriptionSource
GO:0045158TASGene Ontologyelectron transporter, transferring electrons within cytochrome b6/f complex of photosystem II activity1
GO:0005506IEAUniProtiron ion binding1
GO:0009055IEAUniProtelectron carrier activity1
GO:0020037IEAUniProtheme binding1

Cellular Component

GO termEvidence(s)ProviderDescriptionSource
GO:0009507IDA, ISMGene Ontologychloroplast1 2
GO:0009535IEA, IDAUniProtchloroplast thylakoid membrane1 2
GO:0016020IDAGene Ontologymembrane1
GO:0009579IDAGene Ontologythylakoid1
GO:0009534IDAGene Ontologychloroplast thylakoid1
GO:0009512TASGene Ontologycytochrome b6f complex1
GO:0031361IEAUniProtintegral to thylakoid membrane1

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Experimental Evidence
Electronic Evidence
Computational Reviewed Evidence
GO Sources:   Primary     Orthology     Homology  
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InterPro Description
IPR024094Cytochrome f large domain
IPR024058Cytochrome f transmembrane anchor
IPR011054Rudiment single hybrid motif
IPR002325Cytochrome f

Mapman id Description
1.1.3.4PS.lightreaction.cytochrome b6/f.apocytochrome f (CYF)
No SignalP domains detected for this gene.