Gene: AT5G64960 (Arabidopsis thaliana)

Overview top

Gene Identifier
AT5G64960
Transcript Identifier
AT5G64960.1
Gene Type
Coding gene
Location
5 : 25955497-25958427 : positive

Family

Gene family
HOM03D000092
(1044 genes in 31 species)
specific family
Subfamily
ORTHO03D001038
(59 genes in 31 species)
specific family
Duplication type
Block duplicate

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Descriptions

Description
cyclin dependent kinase group C2
Curated Summary
Encodes CDKC;2, part of a CDKC kinase complex that is targeted by Cauliflower mosaic virus (CaMV) for transcriptional activation of viral genes. Also regulates plant growth and development. Co-localizes with spliceosomal components in a manner dependent on the transcriptional status of the cells and on CDKC2-kinase activity. Expression of CDKC2 modifies the location of spliceosomal components.
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Identifiers

Identifier Name
aliasCDKC2
aliascyclin dependent kinase group C2
aliasCyclin-dependent kinase C;2
aliasCDKC;2
uniprotQ8W4P1

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Biological Process

GO termEvidence(s)ProviderDescriptionSource
GO:0009615IEPUniProtresponse to virus1 2 3 4 5 6
GO:0009908IMPGene Ontologyflower development1
GO:0048366IGIUniProtleaf development1 2 3 4 5 6
GO:0048440IGIUniProtcarpel development1 2 3 4 5 6
GO:0050792IMPUniProtregulation of viral process1 2 3 4 5 6
GO:0006397IMP, IEPUniProtmRNA processing1 2 3 4 5 6 7
GO:0010228RCAGene Ontologyvegetative to reproductive phase transition of meristem1
GO:0006468IEAInterProprotein phosphorylation
GO:0044260IEAPLAZA Homologycellular macromolecule metabolic processHOM03D000092
GO:0006796IEAPLAZA Homologyphosphate-containing compound metabolic processHOM03D000092
GO:0006793IEAPLAZA Homologyphosphorus metabolic processHOM03D000092
GO:0043170IEAPLAZA Homologymacromolecule metabolic processHOM03D000092
GO:0044237IEAPLAZA Homologycellular metabolic processHOM03D000092
GO:0044238IEAPLAZA Homologyprimary metabolic processHOM03D000092
GO:0009987IEAPLAZA Homologycellular processHOM03D000092
GO:0016310IEAPLAZA HomologyphosphorylationHOM03D000092
GO:0008152IEAPLAZA Homologymetabolic processHOM03D000092
GO:0043412IEAPLAZA Homologymacromolecule modificationHOM03D000092
GO:0071704IEAPLAZA Homologyorganic substance metabolic processHOM03D000092
GO:0044267IEAPLAZA Homologycellular protein metabolic processHOM03D000092
GO:0019538IEAPLAZA Homologyprotein metabolic processHOM03D000092
GO:0036211IEAPLAZA Homologyprotein modification processHOM03D000092
GO:0006464IEAPLAZA Homologycellular protein modification processHOM03D000092

Molecular Function

GO termEvidence(s)ProviderDescriptionSource
GO:0016301IDA, ISS, UniProtkinase activity1 2 3 4 5 6 7
GO:0005515IPIGene Ontologyprotein binding1
GO:0004672IEAInterProprotein kinase activity
GO:0004674IEAInterProprotein serine/threonine kinase activity
GO:0005524IEAUniProtATP binding1 2 3 4 5
GO:0016772IEAInterProtransferase activity, transferring phosphorus-containing groups
GO:0004693IEAUniProtcyclin-dependent protein serine/threonine kinase activity1 2 3 4 5
GO:0008353IEAUniProtRNA polymerase II carboxy-terminal domain kinase activity1 2 3 4 5
GO:0032555IEAPLAZA Homologypurine ribonucleotide bindingHOM03D000092
GO:0043168IEAPLAZA Homologyanion bindingHOM03D000092
GO:0032553IEAPLAZA Homologyribonucleotide bindingHOM03D000092
GO:0043167IEAPLAZA Homologyion bindingHOM03D000092
GO:0035639IEAPLAZA Homologypurine ribonucleoside triphosphate bindingHOM03D000092
GO:0097367IEAPLAZA Homologycarbohydrate derivative bindingHOM03D000092
GO:0003824IEAPLAZA Homologycatalytic activityHOM03D000092
GO:0032559IEAPLAZA Homologyadenyl ribonucleotide bindingHOM03D000092
GO:1901265IEAPLAZA Homologynucleoside phosphate bindingHOM03D000092
GO:0000166IEAPLAZA Homologynucleotide bindingHOM03D000092
GO:0001882IEAPLAZA Homologynucleoside bindingHOM03D000092
GO:0030554IEAPLAZA Homologyadenyl nucleotide bindingHOM03D000092
GO:0016773IEAPLAZA Homologyphosphotransferase activity, alcohol group as acceptorHOM03D000092
GO:0017076IEAPLAZA Homologypurine nucleotide bindingHOM03D000092
GO:0097159IEAPLAZA Homologyorganic cyclic compound bindingHOM03D000092
GO:0036094IEAPLAZA Homologysmall molecule bindingHOM03D000092
GO:0032549IEAPLAZA Homologyribonucleoside bindingHOM03D000092
GO:0005488IEAPLAZA HomologybindingHOM03D000092
GO:1901363IEAPLAZA Homologyheterocyclic compound bindingHOM03D000092
GO:0001883IEAPLAZA Homologypurine nucleoside bindingHOM03D000092
GO:0032550IEAPLAZA Homologypurine ribonucleoside bindingHOM03D000092
GO:0016740IEAPLAZA Homologytransferase activityHOM03D000092

Cellular Component

GO termEvidence(s)ProviderDescriptionSource
GO:0005634IDA, ISMGene Ontologynucleus1 2
GO:0016604IDAUniProtnuclear body1 2 3 4 5 6
GO:0005829IDAUniProtcytosol1 2 3 4 5 6

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Experimental Evidence
Electronic Evidence
Computational Reviewed Evidence
GO Sources:   Primary     Orthology     Homology  
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InterPro Description
IPR000719Protein kinase domain
IPR002290Serine/threonine- / dual specificity protein kinase, catalytic domain
IPR011009Protein kinase-like domain
IPR008271Serine/threonine-protein kinase, active site
IPR017441Protein kinase, ATP binding site

Mapman id Description
31.3cell.cycle
No SignalP domains detected for this gene.