Gene: AT5G63970 (Arabidopsis thaliana)

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Gene Identifier
AT5G63970
Transcript Identifier
AT5G63970.1
Gene Type
Coding gene
Location
5 : 25607006-25608916 : negative

Family

Gene family
HOM03D000591
(229 genes in 30 species)
specific family
Subfamily
ORTHO03D007133
(31 genes in 26 species)
specific family

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Descriptions

Description
Copine (Calcium-dependent phospholipid-binding protein) family
Curated Summary
Encodes a ubiquitin ligase that is an essential upstream modulator of JA signaling in response to various stimuli.
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Identifiers

Identifier Name
aliasRING DOMAIN LIGASE 3
aliasRGLG3

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Biological Process

GO termEvidence(s)ProviderDescriptionSource
GO:0009690RCAGene Ontologycytokinin metabolic process1
GO:0009611IMPGene Ontologyresponse to wounding1
GO:0009867IMPGene Ontologyjasmonic acid mediated signaling pathway1
GO:0042742IMPGene Ontologydefense response to bacterium1

Molecular Function

GO termEvidence(s)ProviderDescriptionSource
GO:0004842IDAGene Ontologyubiquitin-protein ligase activity1
GO:0005515IEAInterProprotein binding
GO:0008270IEAInterProzinc ion binding

Cellular Component

GO termEvidence(s)ProviderDescriptionSource
GO:0005886ISMGene Ontologyplasma membrane1

Color Legend

Experimental Evidence
Electronic Evidence
Computational Reviewed Evidence
GO Sources:   Primary     Orthology     Homology  
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InterPro Description
IPR002035von Willebrand factor, type A
IPR001841Zinc finger, RING-type
IPR013083Zinc finger, RING/FYVE/PHD-type
IPR010734Copine

Mapman id Description
29.5.11.4.2protein.degradation.ubiquitin.E3.RING
No SignalP domains detected for this gene.