Gene: AT5G62410 (Arabidopsis thaliana)

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Gene Identifier
AT5G62410
Transcript Identifier
AT5G62410.1
Gene Type
Coding gene
Location
5 : 25056308-25062436 : positive

Family

Gene family
HOM03D002910
(62 genes in 30 species)
specific family
Duplication type
Block duplicate

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Descriptions

Description
structural maintenance of chromosomes 2
Curated Summary
SMC2-1 (SMC2)
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Identifiers

Identifier Name
aliasATCAP-E1
aliasSMC2
aliasTITAN 3
aliasstructural maintenance of chromosomes 2
aliasTTN3
aliasATSMC4
uniprotQ9C5Y4

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Biological Process

GO termEvidence(s)ProviderDescriptionSource
GO:0000911RCAGene Ontologycytokinesis by cell plate formation1
GO:0006260RCAGene OntologyDNA replication1
GO:0006261RCAGene OntologyDNA-dependent DNA replication1
GO:0006270RCAGene OntologyDNA replication initiation1
GO:0006275RCAGene Ontologyregulation of DNA replication1
GO:0006306RCAGene OntologyDNA methylation1
GO:0006342RCAGene Ontologychromatin silencing1
GO:0006346RCAGene Ontologymethylation-dependent chromatin silencing1
GO:0008283RCAGene Ontologycell proliferation1
GO:0009909RCAGene Ontologyregulation of flower development1
GO:0010267RCAGene Ontologyproduction of ta-siRNAs involved in RNA interference1
GO:0010389RCAGene Ontologyregulation of G2/M transition of mitotic cell cycle1
GO:0016458RCAGene Ontologygene silencing1
GO:0016570RCAGene Ontologyhistone modification1
GO:0031047RCAGene Ontologygene silencing by RNA1
GO:0031048RCAGene Ontologychromatin silencing by small RNA1
GO:0034968RCAGene Ontologyhistone lysine methylation1
GO:0035196RCAGene Ontologyproduction of miRNAs involved in gene silencing by miRNA1
GO:0048449RCAGene Ontologyfloral organ formation1
GO:0051567RCAGene Ontologyhistone H3-K9 methylation1
GO:0051607RCAGene Ontologydefense response to virus1
GO:0051726RCAGene Ontologyregulation of cell cycle1
GO:0007076IEAUniProtmitotic chromosome condensation1 2 3 4
GO:0051276IEAInterProchromosome organization
GO:0051301IEAUniProtcell division1 2 3 4
GO:0006310IEAUniProtDNA recombination1 2 3 4
GO:0006281IEAUniProtDNA repair1 2 3 4
GO:0007126IEAUniProtmeiosis1 2 3 4
GO:0007062IEAUniProtsister chromatid cohesion1 2 3 4

Molecular Function

GO termEvidence(s)ProviderDescriptionSource
GO:0005215ISSUniProttransporter activity1 2 3 4 5
GO:0005515IEAInterProprotein binding
GO:0005524IEAUniProtATP binding1 2 3 4

Cellular Component

GO termEvidence(s)ProviderDescriptionSource
GO:0005634IEA, ISMUniProtnucleus1 2 3 4 5
GO:0000796ISS, IEA, UniProtcondensin complex1 2 3 4 5
GO:0005694IEAInterProchromosome

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Experimental Evidence
Electronic Evidence
Computational Reviewed Evidence
GO Sources:   Primary     Orthology     Homology  
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InterPro Description
IPR027417P-loop containing nucleoside triphosphate hydrolase
IPR003395RecF/RecN/SMC, N-terminal
IPR010935SMCs flexible hinge
IPR027120Structural maintenance of chromosomes Smc2

Mapman id Description
28.1DNA.synthesis/chromatin structure
No SignalP domains detected for this gene.