Gene: AT5G60170 (Arabidopsis thaliana)

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Gene Identifier
AT5G60170
Transcript Identifier
AT5G60170.2
Gene Type
Coding gene
Location
5 : 24228178-24232394 : positive

Family

Gene family
HOM03D002048
(83 genes in 29 species)
specific family
Subfamily
ORTHO03D013036
(18 genes in 13 species)
specific family
Duplication type
Block duplicate

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Descriptions

Description
RNA binding (RRM/RBD/RNP motifs) family protein
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Identifiers

Identifier Name

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Biological Process

GO termEvidence(s)ProviderDescriptionSource
GO:0010228RCAGene Ontologyvegetative to reproductive phase transition of meristem1
GO:0016926RCAGene Ontologyprotein desumoylation1
GO:0050665RCAGene Ontologyhydrogen peroxide biosynthetic process1

Molecular Function

GO termEvidence(s)ProviderDescriptionSource
GO:0003723ISSGene OntologyRNA binding1
GO:0005515IEAInterProprotein binding
GO:0000166IEAInterPronucleotide binding
GO:0008270IEAInterProzinc ion binding
GO:0003676IEAInterPronucleic acid binding
GO:1901265IEAPLAZA Homologynucleoside phosphate bindingHOM03D002048

Cellular Component

GO termEvidence(s)ProviderDescriptionSource
GO:0005634ISMGene Ontologynucleus1
GO:0009506ISOPLAZA Tree-based OrthologyplasmodesmaAT3G45630

Color Legend

Experimental Evidence
Electronic Evidence
Computational Reviewed Evidence
GO Sources:   Primary     Orthology     Homology  
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InterPro Description
IPR001841Zinc finger, RING-type
IPR012677Nucleotide-binding, alpha-beta plait
IPR000504RNA recognition motif domain
IPR003954RNA recognition motif domain, eukaryote
IPR013083Zinc finger, RING/FYVE/PHD-type

Mapman id Description
27.3.67RNA.regulation of transcription.putative transcription regulator
No SignalP domains detected for this gene.