Gene: AT5G60100 (Arabidopsis thaliana)

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Gene Identifier
AT5G60100
Transcript Identifier
AT5G60100.2
Gene Type
Coding gene
Location
5 : 24198215-24200502 : negative

Family

Gene family
HOM03D000847
(168 genes in 31 species)
specific family
Subfamily
ORTHO03D023675
(5 genes in 5 species)
specific family
Duplication type
Block duplicate

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Descriptions

Description
pseudo-response regulator 3
Curated Summary
Encodes pseudo-response regulator 3 (APRR3/PRR3). PRR3 transcript levels vary in a circadian pattern with peak expression at dusk under long and short day conditions. PRR3 affects the period of the circadian clock and seedlings with reduced levels of PRR3 have shorter periods, based on transcriptional assays of clock-regulated genes. PRR3 is expressed in the vasculature of cotyledons and leaves where it may help stabilize the TOC1 protein by preventing interactions between TOC1 and the F-box protein ZTL.
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Identifiers

Identifier Name
aliaspseudo-response regulator 3
aliasAPRR3
aliasPRR3
uniprotQ9LVG4

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Biological Process

GO termEvidence(s)ProviderDescriptionSource
GO:0007623RCA, TASGene Ontologycircadian rhythm1 2
GO:0042752IEPGene Ontologyregulation of circadian rhythm1
GO:0006355IEA, TASUniProtregulation of transcription, DNA-dependent1 2 3 4 5 6 7 8 9
GO:0032091IDAGene Ontologynegative regulation of protein binding1
GO:0006333RCAGene Ontologychromatin assembly or disassembly1
GO:0000160IEAInterProphosphorelay signal transduction system
GO:0035556IEAUniProtintracellular signal transduction1 2 3 4 5 6 7 8
GO:0048511IEAUniProtrhythmic process1 2 3 4 5 6 7 8
GO:0006351IEAUniProttranscription, DNA-templated1 2 3 4 5 6 7 8
GO:2001141IEAPLAZA Homologyregulation of RNA biosynthetic processHOM03D000847

Molecular Function

GO termEvidence(s)ProviderDescriptionSource
GO:0000156IEA, ISSUniProtphosphorelay response regulator activity1 2 3 4 5 6 7 8 9
GO:0005515IPI, IEAGene Ontologyprotein binding1

Cellular Component

GO termEvidence(s)ProviderDescriptionSource
GO:0005634IEA, IDA, ISMUniProtnucleus1 2 3 4 5 6 7 8 9 10

Color Legend

Experimental Evidence
Electronic Evidence
Computational Reviewed Evidence
GO Sources:   Primary     Orthology     Homology  
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InterPro Description
IPR001789Signal transduction response regulator, receiver domain
IPR010402CCT domain
IPR011006CheY-like superfamily

Mapman id Description
27.3.66RNA.regulation of transcription.Psudo ARR transcription factor family
No SignalP domains detected for this gene.