Gene: AT5G58270 (Arabidopsis thaliana)

Overview top

Gene Identifier
AT5G58270
Transcript Identifier
AT5G58270.1
Gene Type
Coding gene
Location
5 : 23562168-23567040 : positive

Family

Gene family
HOM03D000078
(1155 genes in 31 species)
specific family
Subfamily
ORTHO03D010577
(25 genes in 13 species)
specific family
Duplication type
Block duplicate

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Descriptions

Description
ABC transporter of the mitochondrion 3
Curated Summary
Encodes a mitochondrial half-molecule ABC transporter, a member of ATM subfamily. Mutants are dwarfed, chlorotic plants with altered leaf morphology. ATM3 transcription is induced by Cd(II) or Pb(II). Involved in heavy metal resistance. Arabidopsis thaliana has three ATM genes, namely ATM1, ATM2 and ATM3. Only ATM3 has an important function for plant growth. Role in Moco biosynthesis.
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Identifiers

Identifier Name
aliasATM3
aliasABC transporter of the mitochondrion 3
aliasSTARIK 1
aliasABCB25
aliasATATM3
aliasARABIDOPSIS THALIANA ABC TRANSPORTER OF THE MITOCHONDRION 3
aliasSTA1
aliasATP-binding cassette B25
uniprotQ9LVM1

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Biological Process

GO termEvidence(s)ProviderDescriptionSource
GO:0006200IBAGene OntologyATP catabolic process1
GO:0006879IMP, IBA, IGIUniProtcellular iron ion homeostasis1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16
GO:0055085IBA, IEAGene Ontologytransmembrane transport1
GO:0040014IGIGene Ontologyregulation of multicellular organism growth1
GO:0010288IMPUniProtresponse to lead ion1 2 3 4 5 6 7 8 9 10 11 12 13 14
GO:0046686IMPUniProtresponse to cadmium ion1 2 3 4 5 6 7 8 9 10 11 12 13 14
GO:0009555IMPUniProtpollen development1 2 3 4 5 6 7 8 9 10 11 12 13 14
GO:0009658IMPUniProtchloroplast organization1 2 3 4 5 6 7 8 9 10 11 12 13 14
GO:0010380IMPUniProtregulation of chlorophyll biosynthetic process1 2 3 4 5 6 7 8 9 10 11 12 13 14
GO:0048364IMPUniProtroot development1 2 3 4 5 6 7 8 9 10 11 12 13 14
GO:0050790IMPUniProtregulation of catalytic activity1 2 3 4 5 6 7 8 9 10 11 12 13 14
GO:0006777IMPUniProtMo-molybdopterin cofactor biosynthetic process1 2 3 4 5 6 7 8 9 10 11 12 13 14
GO:0009630RCAGene Ontologygravitropism1
GO:0051276IMPUniProtchromosome organization1 2 3 4 5 6 7 8 9 10 11 12 13 14
GO:0006810IEAInterProtransport
GO:0006811IEAUniProtion transport1 2 3 4 5 6 7 8 9 10 11 12 13
GO:0044765IEAPLAZA Homologysingle-organism transportHOM03D000078
GO:0044763IEAPLAZA Homologysingle-organism cellular processHOM03D000078
GO:0051234IEAPLAZA Homologyestablishment of localizationHOM03D000078
GO:0009987IEAPLAZA Homologycellular processHOM03D000078
GO:0044699IEAPLAZA Homologysingle-organism processHOM03D000078
GO:0051179IEAPLAZA HomologylocalizationHOM03D000078

Molecular Function

GO termEvidence(s)ProviderDescriptionSource
GO:0005215ISSGene Ontologytransporter activity1
GO:0042626IBA, ISSIEA, UniProtATPase activity, coupled to transmembrane movement of substances1 2 3 4 5 6 7 8 9 10 11 12 13 14 15
GO:0017111IEAInterPronucleoside-triphosphatase activity
GO:0000166IEAInterPronucleotide binding
GO:0016887IEAInterProATPase activity
GO:0005524IEAUniProtATP binding1 2 3 4 5 6 7 8 9 10 11 12 13
GO:0032555IEAPLAZA Homologypurine ribonucleotide bindingHOM03D000078
GO:0016817IEAPLAZA Homologyhydrolase activity, acting on acid anhydridesHOM03D000078
GO:0043168IEAPLAZA Homologyanion bindingHOM03D000078
GO:0032553IEAPLAZA Homologyribonucleotide bindingHOM03D000078
GO:0042623IEAPLAZA HomologyATPase activity, coupledHOM03D000078
GO:0043167IEAPLAZA Homologyion bindingHOM03D000078
GO:0035639IEAPLAZA Homologypurine ribonucleoside triphosphate bindingHOM03D000078
GO:0097367IEAPLAZA Homologycarbohydrate derivative bindingHOM03D000078
GO:0003824IEAPLAZA Homologycatalytic activityHOM03D000078
GO:0022804IEAPLAZA Homologyactive transmembrane transporter activityHOM03D000078
GO:0016818IEAPLAZA Homologyhydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydridesHOM03D000078
GO:0032559IEAPLAZA Homologyadenyl ribonucleotide bindingHOM03D000078
GO:1901265IEAPLAZA Homologynucleoside phosphate bindingHOM03D000078
GO:0016462IEAPLAZA Homologypyrophosphatase activityHOM03D000078
GO:0001882IEAPLAZA Homologynucleoside bindingHOM03D000078
GO:0030554IEAPLAZA Homologyadenyl nucleotide bindingHOM03D000078
GO:0016820IEAPLAZA Homologyhydrolase activity, acting on acid anhydrides, catalyzing transmembrane movement of substancesHOM03D000078
GO:0017076IEAPLAZA Homologypurine nucleotide bindingHOM03D000078
GO:0097159IEAPLAZA Homologyorganic cyclic compound bindingHOM03D000078
GO:0015399IEAPLAZA Homologyprimary active transmembrane transporter activityHOM03D000078
GO:0015405IEAPLAZA HomologyP-P-bond-hydrolysis-driven transmembrane transporter activityHOM03D000078
GO:0022857IEAPLAZA Homologytransmembrane transporter activityHOM03D000078
GO:0036094IEAPLAZA Homologysmall molecule bindingHOM03D000078
GO:0032549IEAPLAZA Homologyribonucleoside bindingHOM03D000078
GO:0016787IEAPLAZA Homologyhydrolase activityHOM03D000078
GO:0005488IEAPLAZA HomologybindingHOM03D000078
GO:1901363IEAPLAZA Homologyheterocyclic compound bindingHOM03D000078
GO:0001883IEAPLAZA Homologypurine nucleoside bindingHOM03D000078
GO:0032550IEAPLAZA Homologypurine ribonucleoside bindingHOM03D000078
GO:0043492IEAPLAZA HomologyATPase activity, coupled to movement of substancesHOM03D000078

Cellular Component

GO termEvidence(s)ProviderDescriptionSource
GO:0005739IDA, ISMGene Ontologymitochondrion1 2
GO:0005743IBAUniProtmitochondrial inner membrane1 2 3 4 5 6 7 8 9 10 11 12 13 14
GO:0016021IBA, IEA, UniProtintegral to membrane1 2 3 4 5 6 7 8 9 10 11 12 13 14
GO:0009941IDAUniProtchloroplast envelope1 2 3 4 5 6 7 8 9 10 11 12 13 14
GO:0009507IDAGene Ontologychloroplast1
GO:0031224IEAPLAZA Homologyintrinsic to membraneHOM03D000078
GO:0016020IEAPLAZA HomologymembraneHOM03D000078
GO:0044425IEAPLAZA Homologymembrane partHOM03D000078

Color Legend

Experimental Evidence
Electronic Evidence
Computational Reviewed Evidence
GO Sources:   Primary     Orthology     Homology  
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InterPro Description
IPR001140ABC transporter, transmembrane domain
IPR003439ABC transporter-like
IPR003593AAA+ ATPase domain
IPR011527ABC transporter type 1, transmembrane domain
IPR017871ABC transporter, conserved site
IPR027417P-loop containing nucleoside triphosphate hydrolase

Mapman id Description
34.16transport.ABC transporters and multidrug resistance systems
No SignalP domains detected for this gene.