Gene: AT5G54690 (Arabidopsis thaliana)

Overview top

Gene Identifier
AT5G54690
Transcript Identifier
AT5G54690.1
Gene Type
Coding gene
Location
5 : 22219435-22221769 : negative

Family

Gene family
HOM03D000188
(547 genes in 30 species)
specific family
Subfamily
ORTHO03D003524
(37 genes in 22 species)
specific family

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Descriptions

Description
galacturonosyltransferase 12
Curated Summary
Encodes a protein with putative galacturonosyltransferase activity. Mutants defective in this gene displayed a notable reduction in xylose (>50%) in the cell walls from stems and roots and a reduction in cellulose (~25%).
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Identifiers

Identifier Name
aliasgalacturonosyltransferase 12
aliasGAUT12
aliasIRREGULAR XYLEM 8
aliasLGT6
aliasIRX8
uniprotQ9FH36

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Biological Process

GO termEvidence(s)ProviderDescriptionSource
GO:0016051ISSGene Ontologycarbohydrate biosynthetic process1
GO:0010417IMPUniProtglucuronoxylan biosynthetic process1 2 3 4 5 6 7 8 9
GO:0045492RCA, TASGene Ontologyxylan biosynthetic process1 2
GO:0071555IMPUniProtcell wall organization1 2 3 4 5 6 7 8 9
GO:0010413IMP, RCAGene Ontologyglucuronoxylan metabolic process1 2
GO:0009832RCAGene Ontologyplant-type cell wall biogenesis1
GO:0010089RCAGene Ontologyxylem development1
GO:0044036RCAGene Ontologycell wall macromolecule metabolic process1
GO:0045489IEAUniProtpectin biosynthetic process1 2 3 4 5 6 7 8

Molecular Function

GO termEvidence(s)ProviderDescriptionSource
GO:0016757ISS, IEAGene Ontologytransferase activity, transferring glycosyl groups1
GO:0016758ISSGene Ontologytransferase activity, transferring hexosyl groups1
GO:0047262ISSUniProtpolygalacturonate 4-alpha-galacturonosyltransferase activity1 2 3 4 5 6 7 8 9
GO:0016740IEAPLAZA Homologytransferase activityHOM03D000188

Cellular Component

GO termEvidence(s)ProviderDescriptionSource
GO:0005794IDA, ISM, UniProtGolgi apparatus1 2 3 4 5 6 7 8 9 10
GO:0000139IEAUniProtGolgi membrane1 2 3 4 5 6 7 8
GO:0016021IEAUniProtintegral to membrane1 2 3 4 5 6 7 8

Color Legend

Experimental Evidence
Electronic Evidence
Computational Reviewed Evidence
GO Sources:   Primary     Orthology     Homology  
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InterPro Description
IPR002495Glycosyl transferase, family 8

Mapman id Description
10.3.2cell wall.hemicellulose synthesis.glucuronoxylan
No SignalP domains detected for this gene.