Gene: AT5G54510 (Arabidopsis thaliana)

Overview top

Gene Identifier
AT5G54510
Transcript Identifier
AT5G54510.1
Gene Type
Coding gene
Location
5 : 22131321-22133564 : negative

Family

Gene family
HOM03D000226
(463 genes in 29 species)
specific family
Subfamily
ORTHO03D000025
(295 genes in 29 species)
specific family
Duplication type
Block duplicate

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Descriptions

Description
Auxin-responsive GH3 family protein
Curated Summary
Encodes an IAA-amido synthase that conjugates Ala, Asp, Phe, and Trp to auxin. Lines overexpressing this gene accumulate IAA-ASP and are hypersensitive to several auxins. Identified as a dominant mutation that displays shorter hypocotyls in light grown plants when compared to wild type siblings. Protein is similar to auxin inducible gene from pea (GH3).
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Identifiers

Identifier Name
aliasGretchen Hagen3.6
aliasGH3.6
aliasDFL1
aliasDWARF IN LIGHT 1
uniprotQ9LSQ4

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Biological Process

GO termEvidence(s)ProviderDescriptionSource
GO:0009733IMP, ISS, RCAGene Ontologyresponse to auxin1 2 3
GO:0009734IMP, RCA, UniProtauxin mediated signaling pathway1 2 3 4 5 6
GO:0009826IMPUniProtunidimensional cell growth1 2 3 4 5
GO:0010252TASUniProtauxin homeostasis1 2 3 4 5
GO:0010583RCAGene Ontologyresponse to cyclopentenone1
GO:0009416ISOPLAZA Integrative Orthologyresponse to light stimulusOS01G57610
GO:1901183ISOPLAZA Tree-based Orthologypositive regulation of camalexin biosynthetic processAT4G27260

Molecular Function

GO termEvidence(s)ProviderDescriptionSource
GO:0010279IDAUniProtindole-3-acetic acid amido synthetase activity1 2 3 4 5
GO:0016874IEAPLAZA Homologyligase activityHOM03D000226

Cellular Component

GO termEvidence(s)ProviderDescriptionSource
GO:0005737ISM, ISSGene Ontologycytoplasm1 2
GO:0009507IDAUniProtchloroplast1 2 3 4 5

Color Legend

Experimental Evidence
Electronic Evidence
Computational Reviewed Evidence
GO Sources:   Primary     Orthology     Homology  
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InterPro Description
IPR004993GH3 auxin-responsive promoter

Mapman id Description
17.2.3hormone metabolism.auxin.induced-regulated-responsive-activated
No SignalP domains detected for this gene.