Gene: AT5G53470 (Arabidopsis thaliana)

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Gene Identifier
AT5G53470
Transcript Identifier
AT5G53470.1
Gene Type
Coding gene
Location
5 : 21710497-21712391 : positive

Family

Gene family
HOM03D001737
(95 genes in 31 species)
specific family
Subfamily
ORTHO03D003012
(39 genes in 29 species)
specific family
Duplication type
Block duplicate

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Descriptions

Description
acyl-CoA binding protein 1
Curated Summary
Encodes an acyl-CoA binding protein that is localized to vesicles,and plasma membrane especially in epidermal cells of heart, torpedo and cotyledon stage embryos, cell wall of the seed coat. Northern blot analysis showed that the 1.4 kb ACBP1 mRNA was expressed in silique, root, stem, leaf and flower.
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Identifiers

Identifier Name
aliasAtACBP1
aliasACBP1
aliasACBP
aliasacyl-CoA binding protein 1
aliasACYL-COA BINDING PROTEIN
uniprotQ9SM23

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Biological Process

GO termEvidence(s)ProviderDescriptionSource
GO:0006869TASUniProtlipid transport1 2 3 4 5 6 7 8 9
GO:0010288IEP, IMP, UniProtresponse to lead ion1 2 3 4 5 6 7 8 9 10
GO:0006629IMPUniProtlipid metabolic process1 2 3 4 5 6 7 8 9
GO:0009409IMPUniProtresponse to cold1 2 3 4 5 6 7 8 9
GO:0009737IEPUniProtresponse to abscisic acid1 2 3 4 5 6 7 8 9
GO:0010029IMPUniProtregulation of seed germination1 2 3 4 5 6 7 8 9
GO:0010162IMPUniProtseed dormancy process1 2 3 4 5 6 7 8 9
GO:1900140IMPGene Ontologyregulation of seedling development1

Molecular Function

GO termEvidence(s)ProviderDescriptionSource
GO:0032791IDAUniProtlead ion binding1 2 3 4 5 6 7 8 9
GO:0070300IDAUniProtphosphatidic acid binding1 2 3 4 5 6 7 8 9
GO:0005515IPI, IEAGene Ontologyprotein binding1
GO:0008289IDAGene Ontologylipid binding1
GO:0000062IDA, IEA, UniProtfatty-acyl-CoA binding1 2 3 4 5 6 7 8 9

Cellular Component

GO termEvidence(s)ProviderDescriptionSource
GO:0005886IDA, ISM, UniProtplasma membrane1 2 3 4 5 6 7 8 9 10
GO:0009505IDAUniProtplant-type cell wall1 2 3 4 5 6 7 8 9
GO:0005789IEAUniProtendoplasmic reticulum membrane1 2 3 4 5 6 7 8
GO:0005576IEAUniProtextracellular region1 2 3 4 5 6 7 8
GO:0016021IEAUniProtintegral to membrane1 2 3 4 5 6 7 8
GO:0009514ISOPLAZA Tree-based OrthologyglyoxysomeAT4G27780
GO:0005783ISOPLAZA Tree-based Orthologyendoplasmic reticulumAT4G27780

Color Legend

Experimental Evidence
Electronic Evidence
Computational Reviewed Evidence
GO Sources:   Primary     Orthology     Homology  
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InterPro Description
IPR002110Ankyrin repeat
IPR000582Acyl-CoA-binding protein, ACBP
IPR014352FERM/acyl-CoA-binding protein, 3-helical bundle
IPR020683Ankyrin repeat-containing domain

Mapman id Description
11.1.13lipid metabolism.FA synthesis and FA elongation.acyl-CoA binding protein
No SignalP domains detected for this gene.