Gene: AT5G51940 (Arabidopsis thaliana)

Overview top

Gene Identifier
AT5G51940
Transcript Identifier
AT5G51940.1
Gene Type
Coding gene
Location
5 : 21104679-21105796 : positive

Family

Gene family
HOM03D003700
(50 genes in 31 species)
specific family

Loading...please wait

Descriptions

Description
RNA polymerase Rpb6
Curated Summary
One of two highly similar proteins that can serve as a non-catalytic subunit of nuclear DNA-dependent RNA polymerases II, IV and V; homologous to budding yeast RPB6 and the E. coli RNA polymerase omega subunit. Probably redundant with At2g04630.
Show more...

Identifiers

Identifier Name
aliasNRPE6A
aliasNRPD6A
aliasNRPB6A
uniprotQ9FJ98

Toolbox

Explore

View

 

Biological Process

GO termEvidence(s)ProviderDescriptionSource
GO:0006351IEA, ISSUniProttranscription, DNA-templated1 2 3 4 5
GO:0000394RCAGene OntologyRNA splicing, via endonucleolytic cleavage and ligation1
GO:0006366RCAGene Ontologytranscription from RNA polymerase II promoter1

Molecular Function

GO termEvidence(s)ProviderDescriptionSource
GO:0003677IEA, ISSUniProtDNA binding1 2 3 4 5
GO:0003899IEA, ISSUniProtDNA-directed RNA polymerase activity1 2 3 4 5

Cellular Component

GO termEvidence(s)ProviderDescriptionSource
GO:0005634ISMGene Ontologynucleus1
GO:0000418IDA, IPIUniProtDNA-directed RNA polymerase IV complex1 2 3 4 5
GO:0000419IDA, IPIUniProtDNA-directed RNA polymerase V complex1 2 3 4 5
GO:0005665IDA, IPIUniProtDNA-directed RNA polymerase II, core complex1 2 3 4 5

Color Legend

Experimental Evidence
Electronic Evidence
Computational Reviewed Evidence
GO Sources:   Primary     Orthology     Homology  
Show redundant parents:  
 
InterPro Description
IPR006111Archaeal RpoK/eukaryotic RPB6 RNA polymerase subunit
IPR012293RNA polymerase subunit, RPB6/omega
IPR006110RNA polymerase, subunit omega/K/RPB6
IPR020708DNA-directed RNA polymerase, 14-18kDa subunit, conserved site

Mapman id Description
27.2RNA.transcription
No SignalP domains detected for this gene.