Gene: AT5G49330 (Arabidopsis thaliana)

Overview top

Gene Identifier
AT5G49330
Transcript Identifier
AT5G49330.1
Gene Type
Coding gene
Location
5 : 19999147-20001293 : negative

Family

Gene family
HOM03D000008
(3494 genes in 30 species)
specific family
Subfamily
ORTHO03D011427
(23 genes in 18 species)
specific family
Duplication type
Block duplicate

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Descriptions

Description
myb domain protein 111
Curated Summary
Member of the R2R3 factor gene family.
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Identifiers

Identifier Name
aliasMYB111
aliasPRODUCTION OF FLAVONOL GLYCOSIDES 3
aliasATMYB111
aliasmyb domain protein 111
aliasARABIDOPSIS MYB DOMAIN PROTEIN 111
aliasPFG3

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Biological Process

GO termEvidence(s)ProviderDescriptionSource
GO:0006355ISSGene Ontologyregulation of transcription, DNA-dependent1
GO:0051555IMPGene Ontologyflavonol biosynthetic process1

Molecular Function

GO termEvidence(s)ProviderDescriptionSource
GO:0003677ISS, IEAGene OntologyDNA binding1
GO:0003700ISSGene Ontologysequence-specific DNA binding transcription factor activity1
GO:0003682IEAInterProchromatin binding
GO:0005488IEAPLAZA HomologybindingHOM03D000008
GO:1901363IEAPLAZA Homologyheterocyclic compound bindingHOM03D000008
GO:0097159IEAPLAZA Homologyorganic cyclic compound bindingHOM03D000008
GO:0003676IEAPLAZA Homologynucleic acid bindingHOM03D000008

Cellular Component

GO termEvidence(s)ProviderDescriptionSource
GO:0005634ISMGene Ontologynucleus1

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Experimental Evidence
Electronic Evidence
Computational Reviewed Evidence
GO Sources:   Primary     Orthology     Homology  
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InterPro Description
IPR009057Homeodomain-like
IPR001005SANT/Myb domain
IPR017930Myb domain

Mapman id Description
27.3.25RNA.regulation of transcription.MYB domain transcription factor family
No SignalP domains detected for this gene.

Binding sites bound by this Transcription Factor

Binding siteNameDescriptionCounts
Matrix_299PFG3Not available536 genes in 10 species
Matrix_315MYB111Not available1818 genes in 10 species
Matrix_455MYB111Not available2581 genes in 10 species

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DatabaseType
PlnTFDBMYB