Gene: AT5G49160 (Arabidopsis thaliana)

Overview top

Gene Identifier
AT5G49160
Transcript Identifier
AT5G49160.1
Gene Type
Coding gene
Location
5 : 19932501-19938186 : positive

Family

Gene family
HOM03D000685
(203 genes in 30 species)
specific family
Subfamily
ORTHO03D004136
(36 genes in 20 species)
specific family

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Descriptions

Description
methyltransferase 1
Curated Summary
Encodes a cytosine methyltransferase MET1. Required for silencing of FWA paternal allele in endosperm. Two lines with RNAi constructs directed against DMT1 have reduced agrobacterium-mediated tumor formation.
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Identifiers

Identifier Name
aliasMET1
aliasMETHYLTRANSFERASE I
aliasDNA METHYLTRANSFERASE 01
aliasmethyltransferase 1
aliasDECREASED DNA METHYLATION 2
aliasMETI
aliasDMT1
aliasMET2
aliasDNA METHYLTRANSFERASE 1
aliasMETHYLTRANSFERASE 2
aliasDDM2
aliasDMT01
uniprotP34881

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Biological Process

GO termEvidence(s)ProviderDescriptionSource
GO:0010069IMPUniProtzygote asymmetric cytokinesis in embryo sac1 2 3 4 5 6 7 8 9 10
GO:0006349IMPUniProtregulation of gene expression by genetic imprinting1 2 3 4 5 6 7 8 9 10
GO:0010216IMPUniProtmaintenance of DNA methylation1 2 3 4 5 6 7 8 9 10
GO:0010424IMPUniProtDNA methylation on cytosine within a CG sequence1 2 3 4 5 6 7 8 9 10
GO:0009294IMPUniProtDNA mediated transformation1 2 3 4 5 6 7 8 9 10
GO:0006260RCAGene OntologyDNA replication1
GO:0006261RCAGene OntologyDNA-dependent DNA replication1
GO:0006306RCA, IEAGene OntologyDNA methylation1
GO:0006333RCAGene Ontologychromatin assembly or disassembly1
GO:0006342RCAGene Ontologychromatin silencing1
GO:0008283RCAGene Ontologycell proliferation1
GO:0009909RCAGene Ontologyregulation of flower development1
GO:0016458RCAGene Ontologygene silencing1
GO:0034968RCAGene Ontologyhistone lysine methylation1
GO:0051567RCAGene Ontologyhistone H3-K9 methylation1
GO:0009910IMPUniProtnegative regulation of flower development1 2 3 4 5 6 7 8 9 10
GO:0016568IEAUniProtchromatin modification1 2 3 4 5 6 7 8 9
GO:0006304IEAPLAZA HomologyDNA modificationHOM03D000685
GO:0032259IEAPLAZA HomologymethylationHOM03D000685
GO:0006305IEAPLAZA HomologyDNA alkylationHOM03D000685
GO:0043414IEAPLAZA Homologymacromolecule methylationHOM03D000685
GO:0044728IEAPLAZA HomologyDNA methylation or demethylationHOM03D000685
GO:0040029IEAPLAZA Homologyregulation of gene expression, epigeneticHOM03D000685

Molecular Function

GO termEvidence(s)ProviderDescriptionSource
GO:0005515IPIGene Ontologyprotein binding1
GO:0008168TAS, IEA, UniProtmethyltransferase activity1 2 3 4 5 6 7 8 9 10
GO:0003677IEAUniProtDNA binding1 2 3 4 5 6 7 8 9
GO:0003886IEAUniProtDNA (cytosine-5-)-methyltransferase activity1 2 3 4 5 6 7 8 9

Cellular Component

GO termEvidence(s)ProviderDescriptionSource
GO:0005634IEA, ISMUniProtnucleus1 2 3 4 5 6 7 8 9 10

Color Legend

Experimental Evidence
Electronic Evidence
Computational Reviewed Evidence
GO Sources:   Primary     Orthology     Homology  
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InterPro Description
IPR001025Bromo adjacent homology (BAH) domain
IPR018117DNA methylase, C-5 cytosine-specific, active site
IPR001525C-5 cytosine methyltransferase
IPR022702DNA (cytosine-5)-methyltransferase 1, replication foci domain

Mapman id Description
27.3.46RNA.regulation of transcription.DNA methyltransferases
No SignalP domains detected for this gene.