Gene: AT5G48990 (Arabidopsis thaliana)

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Gene Identifier
AT5G48990
Transcript Identifier
AT5G48990.1
Gene Type
Coding gene
Location
5 : 19862340-19863458 : positive

Family

Gene family
HOM03D000190
(545 genes in 25 species)
specific family
Subfamily
ORTHO03D041689
(3 genes in 3 species)
specific family
Duplication type
Tandem duplicate

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Descriptions

Description
Galactose oxidase/kelch repeat superfamily protein
Curated Summary
encodes an F-box protein that interacts with SKP1 and likely to be involved in ubiquitin-mediated protein degradation.
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Identifiers

Identifier Name
uniprotQ9FI71

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Biological Process

GO termEvidence(s)ProviderDescriptionSource
GO:0006511IDAUniProtubiquitin-dependent protein catabolic process1 2 3
GO:0009409ISOPLAZA Tree-based Orthologyresponse to coldAT4G19330

Molecular Function

GO termEvidence(s)ProviderDescriptionSource
GO:0005515IPI, IEAGene Ontologyprotein binding1

Cellular Component

GO termEvidence(s)ProviderDescriptionSource
GO:0005634ISMGene Ontologynucleus1
GO:0009507ISOPLAZA Tree-based OrthologychloroplastAT5G39560
GO:0009506ISOPLAZA Tree-based OrthologyplasmodesmaAT3G27910

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Experimental Evidence
Electronic Evidence
Computational Reviewed Evidence
GO Sources:   Primary     Orthology     Homology  
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InterPro Description
IPR001810F-box domain
IPR015915Kelch-type beta propeller
IPR006652Kelch repeat type 1

Mapman id Description
29.5.11.4.3.2protein.degradation.ubiquitin.E3.SCF.FBOX
No SignalP domains detected for this gene.