Gene: AT5G48670 (Arabidopsis thaliana)

Overview top

Gene Identifier
AT5G48670
Transcript Identifier
AT5G48670.1
Gene Type
Coding gene
Location
5 : 19738825-19739790 : negative

Family

Gene family
HOM03D000198
(519 genes in 28 species)
specific family
Subfamily
ORTHO03D012262
(20 genes in 8 species)
specific family

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Descriptions

Description
AGAMOUS-like 80
Curated Summary
AGL80 is a member of the MADS box family of genes. AGL80 functions as a transcription factor within the central cell gene regulatory network and controls the expression of downstream genes required for central cell development and function.
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Identifiers

Identifier Name
aliasAGAMOUS-like 80
aliasAGL80
aliasFEM111
uniprotQ9FJK3

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Biological Process

GO termEvidence(s)ProviderDescriptionSource
GO:0009612RCAGene Ontologyresponse to mechanical stimulus1
GO:0019722RCAGene Ontologycalcium-mediated signaling1
GO:0006351IEAUniProttranscription, DNA-templated1 2 3 4 5 6
GO:0006355ISOPLAZA Tree-based Orthologyregulation of transcription, DNA-dependentAT1G22590
GO:0009793ISOPLAZA Tree-based Orthologyembryo development ending in seed dormancyAT1G65330

Molecular Function

GO termEvidence(s)ProviderDescriptionSource
GO:0003677IEA, ISSUniProtDNA binding1 2 3 4 5 6 7
GO:0003700ISSUniProtsequence-specific DNA binding transcription factor activity1 2 3 4 5 6 7
GO:0005515IPIGene Ontologyprotein binding1
GO:0046983IEAInterProprotein dimerization activity
GO:0003676IEAPLAZA Homologynucleic acid bindingHOM03D000198

Cellular Component

GO termEvidence(s)ProviderDescriptionSource
GO:0005634IDA, ISMGene Ontologynucleus1 2
GO:0043078IDAUniProtpolar nucleus1 2 3 4 5 6 7
GO:0090406ISOPLAZA Tree-based Orthologypollen tubeAT1G65330

Color Legend

Experimental Evidence
Electronic Evidence
Computational Reviewed Evidence
GO Sources:   Primary     Orthology     Homology  
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InterPro Description
IPR002100Transcription factor, MADS-box

Mapman id Description
27.3.24RNA.regulation of transcription.MADS box transcription factor family
No SignalP domains detected for this gene.
DatabaseType
PlnTFDBMADS
PlantTFDBM-type