Gene: AT5G48600 (Arabidopsis thaliana)

Overview top

Gene Identifier
AT5G48600
Transcript Identifier
AT5G48600.2
Gene Type
Coding gene
Location
5 : 19701908-19709091 : positive

Family

Gene family
HOM03D003366
(54 genes in 30 species)
specific family

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Descriptions

Description
structural maintenance of chromosome 3
Curated Summary
member of SMC subfamily
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Identifiers

Identifier Name
aliasATSMC3
aliasARABIDOPSIS THALIANA CHROMOSOME ASSOCIATED PROTEIN-C
aliasARABIDOPSIS THALIANA STRUCTURAL MAINTENANCE OF CHROMOSOME 4
aliasSMC3
aliasstructural maintenance of chromosome 3
aliasATSMC4
aliasATCAP-C
uniprotQ9FJL0

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Biological Process

GO termEvidence(s)ProviderDescriptionSource
GO:0007059ISSGene Ontologychromosome segregation1
GO:0000911RCAGene Ontologycytokinesis by cell plate formation1
GO:0006260RCAGene OntologyDNA replication1
GO:0006270RCAGene OntologyDNA replication initiation1
GO:0006275RCAGene Ontologyregulation of DNA replication1
GO:0006306RCAGene OntologyDNA methylation1
GO:0006342RCAGene Ontologychromatin silencing1
GO:0006346RCAGene Ontologymethylation-dependent chromatin silencing1
GO:0007067IEA, RCAUniProtmitosis1 2 3
GO:0007129RCAGene Ontologysynapsis1
GO:0007131RCAGene Ontologyreciprocal meiotic recombination1
GO:0008283RCAGene Ontologycell proliferation1
GO:0009909RCAGene Ontologyregulation of flower development1
GO:0010267RCAGene Ontologyproduction of ta-siRNAs involved in RNA interference1
GO:0010389RCAGene Ontologyregulation of G2/M transition of mitotic cell cycle1
GO:0010564RCAGene Ontologyregulation of cell cycle process1
GO:0016458RCAGene Ontologygene silencing1
GO:0016570RCAGene Ontologyhistone modification1
GO:0031047RCAGene Ontologygene silencing by RNA1
GO:0031048RCAGene Ontologychromatin silencing by small RNA1
GO:0034968RCAGene Ontologyhistone lysine methylation1
GO:0035196RCAGene Ontologyproduction of miRNAs involved in gene silencing by miRNA1
GO:0048449RCAGene Ontologyfloral organ formation1
GO:0051567RCAGene Ontologyhistone H3-K9 methylation1
GO:0051607RCAGene Ontologydefense response to virus1
GO:0051726RCAGene Ontologyregulation of cell cycle1
GO:0051276IEAInterProchromosome organization
GO:0051301IEAUniProtcell division1 2
GO:0030261IEAUniProtchromosome condensation1 2
GO:0006310IEAUniProtDNA recombination1 2
GO:0006281IEAUniProtDNA repair1 2
GO:0007126IEAUniProtmeiosis1 2
GO:0007062IEAUniProtsister chromatid cohesion1 2

Molecular Function

GO termEvidence(s)ProviderDescriptionSource
GO:0005215ISSGene Ontologytransporter activity1
GO:0005524IEA, ISSUniProtATP binding1 2 3
GO:0005515IEAInterProprotein binding

Cellular Component

GO termEvidence(s)ProviderDescriptionSource
GO:0005634IEA, ISM, ISSUniProtnucleus1 2 3 4
GO:0005694IEAUniProtchromosome1 2

Color Legend

Experimental Evidence
Electronic Evidence
Computational Reviewed Evidence
GO Sources:   Primary     Orthology     Homology  
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InterPro Description
IPR027417P-loop containing nucleoside triphosphate hydrolase
IPR010935SMCs flexible hinge
IPR003395RecF/RecN/SMC, N-terminal

Mapman id Description
31.2cell.division
No SignalP domains detected for this gene.