Gene: AT5G39560 (Arabidopsis thaliana)

Overview top

Gene Identifier
AT5G39560
Transcript Identifier
AT5G39560.1
Gene Type
Coding gene
Location
5 : 15841885-15843096 : negative

Family

Gene family
HOM03D000190
(545 genes in 25 species)
specific family
Subfamily
ORTHO03D021753
(6 genes in 3 species)
specific family
Duplication type
Block duplicate

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Descriptions

Description
Galactose oxidase/kelch repeat superfamily protein
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Identifiers

Identifier Name
uniprotQ6NL02

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Biological Process

GO termEvidence(s)ProviderDescriptionSource
GO:0009409ISOPLAZA Tree-based Orthologyresponse to coldAT4G19330
GO:0006511ISOPLAZA Tree-based Orthologyubiquitin-dependent protein catabolic processAT5G48990

Molecular Function

GO termEvidence(s)ProviderDescriptionSource
GO:0005515IEAInterProprotein binding

Cellular Component

GO termEvidence(s)ProviderDescriptionSource
GO:0005634ISMGene Ontologynucleus1
GO:0009507IDAUniProtchloroplast1 2
GO:0009506ISOPLAZA Tree-based OrthologyplasmodesmaAT3G27910

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Experimental Evidence
Electronic Evidence
Computational Reviewed Evidence
GO Sources:   Primary     Orthology     Homology  
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InterPro Description
IPR015916Galactose oxidase, beta-propeller
IPR001810F-box domain
IPR006652Kelch repeat type 1

Mapman id Description
29.5.11.4.3.2protein.degradation.ubiquitin.E3.SCF.FBOX
No SignalP domains detected for this gene.