Gene: AT5G27640 (Arabidopsis thaliana)

Overview top

Gene Identifier
AT5G27640
Transcript Identifier
AT5G27640.2
Gene Type
Coding gene
Location
5 : 9781207-9784759 : negative

Family

Gene family
HOM03D001246
(123 genes in 31 species)
specific family

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Descriptions

Description
translation initiation factor 3B1
Curated Summary
encodes a member of eukaryotic translation initiation factor 3B family.
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Identifiers

Identifier Name
aliasATTIF3B1
aliasATEIF3B-1
aliasARABIDOPSIS THALIANA TRANSLATION INITIATION FACTOR 3B1
aliasEIF3B
aliasEUKARYOTIC TRANSLATION INITIATION FACTOR 3B
aliastranslation initiation factor 3B1
aliasEUKARYOTIC TRANSLATION INITIATION FACTOR 3B1
aliasEIF3B-1
aliasTIF3B1
uniprotQ9C5Z1

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Biological Process

GO termEvidence(s)ProviderDescriptionSource
GO:0006413IEAInterProtranslational initiation
GO:0001731IEAUniProtformation of translation preinitiation complex1 2 3 4
GO:0006446IEAUniProtregulation of translational initiation1 2 3 4

Molecular Function

GO termEvidence(s)ProviderDescriptionSource
GO:0003676ISSGene Ontologynucleic acid binding1
GO:0003743IEA, ISS, TASUniProttranslation initiation factor activity1 2 3 4 5 6
GO:0005515IEAInterProprotein binding
GO:0000166IEAUniProtnucleotide binding1 2 3 4
GO:0003723IEAInterProRNA binding
GO:0031369IEAInterProtranslation initiation factor binding
GO:1901265IEAPLAZA Homologynucleoside phosphate bindingHOM03D001246

Cellular Component

GO termEvidence(s)ProviderDescriptionSource
GO:0005737ISMGene Ontologycytoplasm1
GO:0005852IEA, ISSUniProteukaryotic translation initiation factor 3 complex1 2 3 4 5
GO:0005634IDAGene Ontologynucleus1
GO:0005829IDAGene Ontologycytosol1
GO:0016282IEAUniProteukaryotic 43S preinitiation complex1 2 3 4
GO:0033290IEAUniProteukaryotic 48S preinitiation complex1 2 3 4

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Experimental Evidence
Electronic Evidence
Computational Reviewed Evidence
GO Sources:   Primary     Orthology     Homology  
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InterPro Description
IPR015943WD40/YVTN repeat-like-containing domain
IPR011400Eukaryotic translation initiation factor 3 subunit B
IPR012677Nucleotide-binding, alpha-beta plait
IPR013979Translation initiation factor, beta propellor-like domain
IPR011042Six-bladed beta-propeller, TolB-like

Mapman id Description
29.2.3protein.synthesis.initiation
No SignalP domains detected for this gene.