Gene: AT5G27620 (Arabidopsis thaliana)
Overview 
- Gene Identifier
- AT5G27620
- Transcript Identifier
- AT5G27620.1
- Gene Type
- Coding gene
- Location
- 5 : 9771762-9774684 : positive
Family
- Gene family
- Subfamily
Identifiers
Identifier | Name |
---|---|
alias | CYCH;1 |
alias | cyclin H;1 |
uniprot | Q8W5S1 |
Toolbox
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- ...the colinearity of this gene with other genomes.
- ...the local gene organization for homologous genes.
- ...the phylogenetic tree of the homologous gene family.
- ...the orthologs using the Integrative Orthology Viewer.
- ...the conserved binding sites (upstream/downstream,intron)
View
Biological Process
GO term | Evidence(s) | Provider | Description | Source |
---|---|---|---|---|
GO:0051726 | ISS | Gene Ontology | regulation of cell cycle | 1 |
GO:0000278 | RCA | Gene Ontology | mitotic cell cycle | 1 |
GO:0000394 | RCA | Gene Ontology | RNA splicing, via endonucleolytic cleavage and ligation | 1 |
GO:0006366 | RCA | Gene Ontology | transcription from RNA polymerase II promoter | 1 |
GO:0006396 | RCA | Gene Ontology | RNA processing | 1 |
GO:0009220 | RCA | Gene Ontology | pyrimidine ribonucleotide biosynthetic process | 1 |
GO:0010440 | RCA | Gene Ontology | stomatal lineage progression | 1 |
GO:0042023 | RCA | Gene Ontology | DNA endoreduplication | 1 |
GO:0045736 | RCA | Gene Ontology | negative regulation of cyclin-dependent protein serine/threonine kinase activity | 1 |
GO:0006355 | IEP, IEA, | UniProt | regulation of transcription, DNA-dependent | 1 2 3 4 5 6 |
GO:0009414 | IMP | UniProt | response to water deprivation | 1 2 3 4 5 6 |
GO:0010119 | IMP | UniProt | regulation of stomatal movement | 1 2 3 4 5 6 |
GO:0072593 | IMP | UniProt | reactive oxygen species metabolic process | 1 2 3 4 5 6 |
GO:1990069 | IMP | UniProt | stomatal opening | 1 2 3 4 5 6 |
GO:2000070 | IMP | UniProt | regulation of response to water deprivation | 1 2 3 4 5 6 |
GO:0000079 | IEA | UniProt | regulation of cyclin-dependent protein serine/threonine kinase activity | 1 2 3 4 5 |
GO:0006351 | IEA | UniProt | transcription, DNA-templated | 1 2 3 4 5 |
GO:0007049 | IEA | UniProt | cell cycle | 1 2 3 4 5 |
GO:0051301 | IEA | UniProt | cell division | 1 2 3 4 5 |
GO:2001141 | IEA | PLAZA Homology | regulation of RNA biosynthetic process | HOM03D004639 |
Molecular Function
GO term | Evidence(s) | Provider | Description | Source |
---|---|---|---|---|
GO:0004693 | ISS | Gene Ontology | cyclin-dependent protein serine/threonine kinase activity | 1 |
GO:0004672 | IDA | UniProt | protein kinase activity | 1 2 3 4 5 6 |
GO:0005515 | IPI | Gene Ontology | protein binding | 1 |
GO:0019901 | IEA | InterPro | protein kinase binding | |
GO:0016538 | IEA | UniProt | cyclin-dependent protein serine/threonine kinase regulator activity | 1 2 3 4 5 |
Cellular Component
GO term | Evidence(s) | Provider | Description | Source |
---|---|---|---|---|
GO:0005634 | IDA, ISM, | UniProt | nucleus | 1 2 3 4 5 6 7 |
GO:0005737 | IDA | UniProt | cytoplasm | 1 2 3 4 5 6 |
GO:0070985 | IEA | UniProt | TFIIK complex | 1 2 3 4 5 |
GO:0005675 | IEA | PLAZA Homology | holo TFIIH complex | HOM03D004639 |
Color Legend
Experimental Evidence |
Electronic Evidence |
Computational Reviewed Evidence |
Mapman id | Description |
---|---|
31.3 | cell.cycle |
No SignalP domains detected for this gene.