Gene: AT5G27420 (Arabidopsis thaliana)

Overview top

Gene Identifier
AT5G27420
Transcript Identifier
AT5G27420.1
Gene Type
Coding gene
Location
5 : 9684119-9685225 : positive

Family

Gene family
HOM03D000017
(2380 genes in 31 species)
specific family
Subfamily
ORTHO03D074803
(2 genes in 2 species)
specific family
Duplication type
Block duplicate

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Descriptions

Description
carbon/nitrogen insensitive 1
Curated Summary
Encodes CNI1 (Carbon/Nitrogen Insensitive1) (also named as ATL31), a RING type ubiquitin ligase that functions in the Carbon/Nitrogen response for growth phase transition in Arabidopsis seedlings.
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Identifiers

Identifier Name
aliascarbon/nitrogen insensitive 1
aliasArabidopsis toxicos en levadura 31
aliasCNI1
aliasATL31
uniprotQ8LGA5

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Biological Process

GO termEvidence(s)ProviderDescriptionSource
GO:0009737IEP, RCA, UniProtresponse to abscisic acid1 2 3 4 5 6 7
GO:0010200IEP, RCA, UniProtresponse to chitin1 2 3 4 5 6 7
GO:0043562IMPUniProtcellular response to nitrogen levels1 2 3 4 5 6
GO:0009814IEPGene Ontologydefense response, incompatible interaction1
GO:0009816IMPUniProtdefense response to bacterium, incompatible interaction1 2 3 4 5 6
GO:0002679RCAGene Ontologyrespiratory burst involved in defense response1
GO:0007165RCAGene Ontologysignal transduction1
GO:0009414RCAGene Ontologyresponse to water deprivation1
GO:0009611RCAGene Ontologyresponse to wounding1
GO:0009693RCAGene Ontologyethylene biosynthetic process1
GO:0009723RCAGene Ontologyresponse to ethylene1
GO:0009733RCAGene Ontologyresponse to auxin1
GO:0009738RCAGene Ontologyabscisic acid-activated signaling pathway1
GO:0009753RCAGene Ontologyresponse to jasmonic acid1
GO:0030968RCAGene Ontologyendoplasmic reticulum unfolded protein response1
GO:0035556RCAGene Ontologyintracellular signal transduction1
GO:0042538RCAGene Ontologyhyperosmotic salinity response1

Molecular Function

GO termEvidence(s)ProviderDescriptionSource
GO:0008270IEA, ISSUniProtzinc ion binding1 2 3 4 5 6
GO:0004842IDAUniProtubiquitin-protein ligase activity1 2 3 4 5 6
GO:0005515IEAInterProprotein binding
GO:0043169IEAPLAZA Homologycation bindingHOM03D000017
GO:0005488IEAPLAZA HomologybindingHOM03D000017
GO:0043167IEAPLAZA Homologyion bindingHOM03D000017
GO:0046914IEAPLAZA Homologytransition metal ion bindingHOM03D000017
GO:0046872IEAPLAZA Homologymetal ion bindingHOM03D000017

Cellular Component

GO termEvidence(s)ProviderDescriptionSource
GO:0005576ISMGene Ontologyextracellular region1
GO:0016020IDAUniProtmembrane1 2 3 4 5 6
GO:0016021IEAUniProtintegral to membrane1 2 3 4 5

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Experimental Evidence
Electronic Evidence
Computational Reviewed Evidence
GO Sources:   Primary     Orthology     Homology  
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InterPro Description
IPR013083Zinc finger, RING/FYVE/PHD-type
IPR001841Zinc finger, RING-type

Mapman id Description
29.5.11.4.2protein.degradation.ubiquitin.E3.RING
SignalP Description
SignalP-TMSignal Peptide detected using TM network