Gene: AT5G25890 (Arabidopsis thaliana)

Overview top

Gene Identifier
AT5G25890
Transcript Identifier
AT5G25890.1
Gene Type
Coding gene
Location
5 : 9033480-9034554 : positive

Family

Gene family
HOM03D000122
(802 genes in 29 species)
specific family
Subfamily
ORTHO03D028006
(5 genes in 5 species)
specific family

Loading...please wait

Descriptions

Description
indole-3-acetic acid inducible 28
Curated Summary
encodes a protein that may be a negative regulator of lateral root formation in response to auxin. It is a member of IAA/ARF gene family and is plant-specific. Gain of function mutations in this gene suppresses lateral root formation and is resistant to inhibition of root elongation by auxin, cytokinin, and ethylene.
Show more...

Identifiers

Identifier Name
aliasIAA28
aliasindole-3-acetic acid inducible 28
aliasIAA-ALANINE RESISTANT 2
aliasIAR2
uniprotQ9XFM0

Toolbox

Explore

View

 

Biological Process

GO termEvidence(s)ProviderDescriptionSource
GO:0006417ISSGene Ontologyregulation of translation1
GO:0009733IMPUniProtresponse to auxin1 2 3 4 5 6 7
GO:0010102IMPUniProtlateral root morphogenesis1 2 3 4 5 6 7
GO:0006612RCAGene Ontologyprotein targeting to membrane1
GO:0009963RCAGene Ontologypositive regulation of flavonoid biosynthetic process1
GO:0010363RCAGene Ontologyregulation of plant-type hypersensitive response1
GO:0006355IEAInterProregulation of transcription, DNA-dependent
GO:0009734IEAUniProtauxin mediated signaling pathway1 2 3 4 5 6
GO:0006351IEAUniProttranscription, DNA-templated1 2 3 4 5 6
GO:0010468IEAPLAZA Homologyregulation of gene expressionHOM03D000122
GO:0010467IEAPLAZA Homologygene expressionHOM03D000122
GO:0006807IEAPLAZA Homologynitrogen compound metabolic processHOM03D000122
GO:0051252IEAPLAZA Homologyregulation of RNA metabolic processHOM03D000122
GO:0051171IEAPLAZA Homologyregulation of nitrogen compound metabolic processHOM03D000122
GO:0044260IEAPLAZA Homologycellular macromolecule metabolic processHOM03D000122
GO:0019222IEAPLAZA Homologyregulation of metabolic processHOM03D000122
GO:0019219IEAPLAZA Homologyregulation of nucleobase-containing compound metabolic processHOM03D000122
GO:0034641IEAPLAZA Homologycellular nitrogen compound metabolic processHOM03D000122
GO:0034645IEAPLAZA Homologycellular macromolecule biosynthetic processHOM03D000122
GO:0050789IEAPLAZA Homologyregulation of biological processHOM03D000122
GO:0009889IEAPLAZA Homologyregulation of biosynthetic processHOM03D000122
GO:0018130IEAPLAZA Homologyheterocycle biosynthetic processHOM03D000122
GO:0043170IEAPLAZA Homologymacromolecule metabolic processHOM03D000122
GO:0019438IEAPLAZA Homologyaromatic compound biosynthetic processHOM03D000122
GO:0046483IEAPLAZA Homologyheterocycle metabolic processHOM03D000122
GO:0016070IEAPLAZA HomologyRNA metabolic processHOM03D000122
GO:0009987IEAPLAZA Homologycellular processHOM03D000122
GO:0044271IEAPLAZA Homologycellular nitrogen compound biosynthetic processHOM03D000122
GO:0065007IEAPLAZA Homologybiological regulationHOM03D000122
GO:0010556IEAPLAZA Homologyregulation of macromolecule biosynthetic processHOM03D000122
GO:0006139IEAPLAZA Homologynucleobase-containing compound metabolic processHOM03D000122
GO:0032774IEAPLAZA HomologyRNA biosynthetic processHOM03D000122
GO:0006725IEAPLAZA Homologycellular aromatic compound metabolic processHOM03D000122
GO:1901576IEAPLAZA Homologyorganic substance biosynthetic processHOM03D000122
GO:0090304IEAPLAZA Homologynucleic acid metabolic processHOM03D000122
GO:0080090IEAPLAZA Homologyregulation of primary metabolic processHOM03D000122
GO:2001141IEAPLAZA Homologyregulation of RNA biosynthetic processHOM03D000122
GO:0044237IEAPLAZA Homologycellular metabolic processHOM03D000122
GO:0044238IEAPLAZA Homologyprimary metabolic processHOM03D000122
GO:0009058IEAPLAZA Homologybiosynthetic processHOM03D000122
GO:0009059IEAPLAZA Homologymacromolecule biosynthetic processHOM03D000122
GO:0060255IEAPLAZA Homologyregulation of macromolecule metabolic processHOM03D000122
GO:2000112IEAPLAZA Homologyregulation of cellular macromolecule biosynthetic processHOM03D000122
GO:0031323IEAPLAZA Homologyregulation of cellular metabolic processHOM03D000122
GO:0031326IEAPLAZA Homologyregulation of cellular biosynthetic processHOM03D000122
GO:1901360IEAPLAZA Homologyorganic cyclic compound metabolic processHOM03D000122
GO:1901362IEAPLAZA Homologyorganic cyclic compound biosynthetic processHOM03D000122
GO:0034654IEAPLAZA Homologynucleobase-containing compound biosynthetic processHOM03D000122
GO:0050794IEAPLAZA Homologyregulation of cellular processHOM03D000122
GO:0008152IEAPLAZA Homologymetabolic processHOM03D000122
GO:0071704IEAPLAZA Homologyorganic substance metabolic processHOM03D000122
GO:0044249IEAPLAZA Homologycellular biosynthetic processHOM03D000122

Molecular Function

GO termEvidence(s)ProviderDescriptionSource
GO:0003700ISSUniProtsequence-specific DNA binding transcription factor activity1 2 3 4 5 6 7
GO:0005515IPIGene Ontologyprotein binding1
GO:0046983IEAInterProprotein dimerization activity
GO:0005488IEAPLAZA HomologybindingHOM03D000122

Cellular Component

GO termEvidence(s)ProviderDescriptionSource
GO:0005622ISSGene Ontologyintracellular1
GO:0005634IEA, ISMUniProtnucleus1 2 3 4 5 6 7
GO:0043231IEAPLAZA Homologyintracellular membrane-bounded organelleHOM03D000122
GO:0043226IEAPLAZA HomologyorganelleHOM03D000122
GO:0043227IEAPLAZA Homologymembrane-bounded organelleHOM03D000122
GO:0043229IEAPLAZA Homologyintracellular organelleHOM03D000122
GO:0044464IEAPLAZA Homologycell partHOM03D000122
GO:0044424IEAPLAZA Homologyintracellular partHOM03D000122
GO:0005623IEAPLAZA HomologycellHOM03D000122

Color Legend

Experimental Evidence
Electronic Evidence
Computational Reviewed Evidence
GO Sources:   Primary     Orthology     Homology  
Show redundant parents:  
 
InterPro Description
IPR011525Aux/IAA-ARF-dimerisation
IPR003311AUX/IAA protein

Mapman id Description
27.3.40RNA.regulation of transcription.Aux/IAA family
No SignalP domains detected for this gene.
DatabaseType
PlnTFDBAUX/IAA