Gene: AT5G24630 (Arabidopsis thaliana)

Overview top

Gene Identifier
AT5G24630
Transcript Identifier
AT5G24630.6
Gene Type
Coding gene
Location
5 : 8432523-8435682 : negative

Family

Gene family
HOM03D005411
(39 genes in 30 species)
specific family
Subfamily
ORTHO03D006717
(32 genes in 28 species)
specific family

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Descriptions

Description
double-stranded DNA binding
Curated Summary
This gene is predicted to encode a protein that forms part of the topoisomerase VI complex. BIN4 is a nuclear-localized protein that can bind DNA. bin4 mutants are brassinolide-insensitive dwarves with severely reduced cell size in leaves, roots, and hypocotyls. Proper development of root hairs and trichomes is also disrupted in bin4 mutants and they have elevated levels of double strand breaks in their cotyledon cells.
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Identifiers

Identifier Name
aliasMID
aliasBIN4
aliasbrassinosteroid-insensitive4
aliasMIDGET
uniprotQ9FLU1

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Biological Process

GO termEvidence(s)ProviderDescriptionSource
GO:0009913IMPGene Ontologyepidermal cell differentiation1
GO:0010090IMP, RCA, UniProttrichome morphogenesis1 2 3 4 5
GO:0030307IMPUniProtpositive regulation of cell growth1 2 3 4
GO:0042023IMPUniProtDNA endoreduplication1 2 3 4
GO:0048364IMPUniProtroot development1 2 3 4
GO:0048367IMPUniProtshoot system development1 2 3 4
GO:0051276IMP, RCA, UniProtchromosome organization1 2 3 4 5
GO:0000003RCAGene Ontologyreproduction1
GO:0000278RCAGene Ontologymitotic cell cycle1
GO:0003002RCAGene Ontologyregionalization1
GO:0006259RCAGene OntologyDNA metabolic process1
GO:0006325RCAGene Ontologychromatin organization1
GO:0006355RCAGene Ontologyregulation of transcription, DNA-dependent1
GO:0007062RCAGene Ontologysister chromatid cohesion1
GO:0007126RCAGene Ontologymeiosis1
GO:0007131RCAGene Ontologyreciprocal meiotic recombination1
GO:0007155RCAGene Ontologycell adhesion1
GO:0008284RCAGene Ontologypositive regulation of cell proliferation1
GO:0009410RCAGene Ontologyresponse to xenobiotic stimulus1
GO:0010638RCAGene Ontologypositive regulation of organelle organization1
GO:0033043RCAGene Ontologyregulation of organelle organization1
GO:0033044RCAGene Ontologyregulation of chromosome organization1
GO:0042138RCAGene Ontologymeiotic DNA double-strand break formation1
GO:0043687RCAGene Ontologypost-translational protein modification1
GO:0045010RCAGene Ontologyactin nucleation1
GO:0045132RCAGene Ontologymeiotic chromosome segregation1
GO:0045893RCAGene Ontologypositive regulation of transcription, DNA-dependent1
GO:0048449RCAGene Ontologyfloral organ formation1
GO:0048522RCAGene Ontologypositive regulation of cellular process1
GO:0048765RCAGene Ontologyroot hair cell differentiation1
GO:0071555RCAGene Ontologycell wall organization1

Molecular Function

GO termEvidence(s)ProviderDescriptionSource
GO:0003690IDAUniProtdouble-stranded DNA binding1 2 3 4

Cellular Component

GO termEvidence(s)ProviderDescriptionSource
GO:0005634IDAUniProtnucleus1 2 3 4
GO:0009330IPIUniProtDNA topoisomerase complex (ATP-hydrolyzing)1 2 3 4

Color Legend

Experimental Evidence
Electronic Evidence
Computational Reviewed Evidence
GO Sources:   Primary     Orthology     Homology  
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No InterPro domains detected for this gene.
Mapman id Description
35.2not assigned.unknown
No SignalP domains detected for this gene.