Gene: AT5G19000 (Arabidopsis thaliana)

Overview top

Gene Identifier
AT5G19000
Transcript Identifier
AT5G19000.2
Gene Type
Coding gene
Location
5 : 6342563-6344641 : positive

Family

Gene family
HOM03D000348
(346 genes in 31 species)
specific family
Subfamily
ORTHO03D010088
(26 genes in 14 species)
specific family
Duplication type
Block duplicate

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Descriptions

Description
BTB-POZ and MATH domain 1
Curated Summary
Encodes a member of the MATH-BTB domain proteins (BPMs) that directly interact with and target for proteasomal degradation the class I homeobox-leucine zipper (HD-ZIP) transcription factor ATHB6. Known members include AT5G19000 (BPM1), AT3G06190 (BPM2), AT2G39760 (BPM3), AT3G03740 (BPM4), AT5G21010 (BPM5) and AT3G43700 (BPM6).
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Identifiers

Identifier Name
aliasBPM1
aliasBTB-POZ AND MATH DOMAIN 1
aliasATBPM1
aliasBTB-POZ and MATH domain 1
uniprotQ8L765

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Biological Process

GO termEvidence(s)ProviderDescriptionSource
GO:0006970IEPGene Ontologyresponse to osmotic stress1
GO:0042631IEPGene Ontologycellular response to water deprivation1
GO:0071472IEPGene Ontologycellular response to salt stress1
GO:0016567IEAUniProtprotein ubiquitination1 2 3 4 5 6 7

Molecular Function

GO termEvidence(s)ProviderDescriptionSource
GO:0005515IPI, IEAGene Ontologyprotein binding1
GO:0042802IPIGene Ontologyidentical protein binding1

Cellular Component

GO termEvidence(s)ProviderDescriptionSource
GO:0005634IEA, IDA, ISMUniProtnucleus1 2 3 4 5 6 7 8 9
GO:0005829ISOPLAZA Tree-based OrthologycytosolAT5G21010

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Experimental Evidence
Electronic Evidence
Computational Reviewed Evidence
GO Sources:   Primary     Orthology     Homology  
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InterPro Description
IPR011333BTB/POZ fold
IPR013069BTB/POZ
IPR000210BTB/POZ-like
IPR008974TRAF-like
IPR002083MATH

Mapman id Description
29.5.11.4.5.2protein.degradation.ubiquitin.E3.BTB/POZ Cullin3.BTB/POZ
No SignalP domains detected for this gene.