Gene: AT5G16830 (Arabidopsis thaliana)

Overview top

Gene Identifier
AT5G16830
Transcript Identifier
AT5G16830.1
Gene Type
Coding gene
Location
5 : 5533076-5535152 : negative

Family

Gene family
HOM03D001225
(125 genes in 31 species)
specific family
Subfamily
ORTHO03D017479
(9 genes in 8 species)
specific family
Duplication type
Block duplicate

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Descriptions

Description
syntaxin of plants 21
Curated Summary
member of SYP2 Gene Family. Over-expression of the gene in tobacco protoplasts leads to a disruption of vacuolar transport from the prevacuolar compartment (PVC) to the vacuole, but not from the Golgi apparatus to the plasma membrane.
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Identifiers

Identifier Name
aliasATPEP12
aliassyntaxin of plants 21
aliasSYP21
aliasATSYP21
aliasPEP12
aliasPEP12P
uniprotQ39233

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Biological Process

GO termEvidence(s)ProviderDescriptionSource
GO:0006896TASUniProtGolgi to vacuole transport1 2 3 4 5 6 7
GO:0006886TAS, IEAGene Ontologyintracellular protein transport1
GO:0045324IMPUniProtlate endosome to vacuole transport1 2 3 4 5 6 7
GO:0006623IDA, RCA, UniProtprotein targeting to vacuole1 2 3 4 5 6 7 8
GO:0009556RCAGene Ontologymicrosporogenesis1
GO:0010200RCAGene Ontologyresponse to chitin1
GO:0016192RCA, IEAGene Ontologyvesicle-mediated transport1
GO:0016197RCAGene Ontologyendosomal transport1
GO:0048193RCAGene OntologyGolgi vesicle transport1
GO:0052543RCAGene Ontologycallose deposition in cell wall1
GO:0070727IEAPLAZA Homologycellular macromolecule localizationHOM03D001225

Molecular Function

GO termEvidence(s)ProviderDescriptionSource
GO:0005515IPI, IEAGene Ontologyprotein binding1
GO:0005484IDA, IMP, TASIEA, UniProtSNAP receptor activity1 2 3 4 5 6 7 8 9

Cellular Component

GO termEvidence(s)ProviderDescriptionSource
GO:0005794ISMGene OntologyGolgi apparatus1
GO:0005770IDA, TAS, UniProtlate endosome1 2 3 4 5 6 7 8
GO:0030140IDA, TAS, UniProttrans-Golgi network transport vesicle1 2 3 4 5 6 7 8
GO:0016020IDA, IEA, UniProtmembrane1 2 3 4 5 6 7
GO:0016021IEAUniProtintegral to membrane1 2 3 4 5 6
GO:0031902IEAUniProtlate endosome membrane1 2 3 4 5 6

Color Legend

Experimental Evidence
Electronic Evidence
Computational Reviewed Evidence
GO Sources:   Primary     Orthology     Homology  
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InterPro Description
IPR006012Syntaxin/epimorphin, conserved site
IPR000727Target SNARE coiled-coil domain
IPR006011Syntaxin, N-terminal domain
IPR010989t-SNARE

Mapman id Description
31.4cell.vesicle transport
No SignalP domains detected for this gene.