Gene: AT5G16530 (Arabidopsis thaliana)

Overview top

Gene Identifier
AT5G16530
Transcript Identifier
AT5G16530.1
Gene Type
Coding gene
Location
5 : 5400735-5402626 : positive

Family

Gene family
HOM03D000385
(323 genes in 29 species)
specific family
Subfamily
ORTHO03D005704
(33 genes in 27 species)
specific family
Duplication type
Block duplicate

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Descriptions

Description
Auxin efflux carrier family protein
Curated Summary
Encodes PIN5, an atypical member of the PIN family. PIN5 is a functional auxin transporter that is required for auxin-mediated development. PIN5 does not have a direct role in cell-to-cell transport but regulates intracellular auxin homeostasis and metabolism. PIN5 localizes, unlike other characterized plasma membrane PIN proteins, to endoplasmic reticulum (ER), presumably mediating auxin flow from the cytosol to the lumen of the ER. It acts together with PIN8 in affecting pollen development and auxin homeostasis.
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Identifiers

Identifier Name
aliasPIN5
aliasPIN-FORMED 5
uniprotQ9FFD0

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Biological Process

GO termEvidence(s)ProviderDescriptionSource
GO:0009926ISSGene Ontologyauxin polar transport1
GO:0010252IMPUniProtauxin homeostasis1 2
GO:0080162IDAUniProtintracellular auxin transport1 2
GO:0009555IMP, IGIUniProtpollen development1 2 3
GO:0055085IEAInterProtransmembrane transport
GO:0009734IEAUniProtauxin mediated signaling pathway1
GO:0010315ISOPLAZA Integrative Orthologyauxin effluxSL04G056620 SL01G068410
GO:0044765IEAPLAZA Homologysingle-organism transportHOM03D000385
GO:0006810IEAPLAZA HomologytransportHOM03D000385
GO:0051234IEAPLAZA Homologyestablishment of localizationHOM03D000385
GO:0051179IEAPLAZA HomologylocalizationHOM03D000385

Molecular Function

GO termEvidence(s)ProviderDescriptionSource
GO:0005215ISSGene Ontologytransporter activity1
GO:0009672ISSGene Ontologyauxin:hydrogen symporter activity1
GO:0080161IDAUniProtauxin transmembrane transporter activity1 2
GO:0010329ISOPLAZA Integrative Orthologyauxin efflux transmembrane transporter activitySL04G056620 SL01G068410

Cellular Component

GO termEvidence(s)ProviderDescriptionSource
GO:0005783IDAUniProtendoplasmic reticulum1 2
GO:0016021IEAUniProtintegral to membrane1
GO:0016020IEAPLAZA HomologymembraneHOM03D000385
GO:0031224IEAPLAZA Homologyintrinsic to membraneHOM03D000385
GO:0044425IEAPLAZA Homologymembrane partHOM03D000385

Color Legend

Experimental Evidence
Electronic Evidence
Computational Reviewed Evidence
GO Sources:   Primary     Orthology     Homology  
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InterPro Description
IPR014024Auxin efflux carrier, plant type
IPR004776Auxin efflux carrier

Mapman id Description
17.2.2hormone metabolism.auxin.signal transduction
No SignalP domains detected for this gene.