Gene: AT5G15840 (Arabidopsis thaliana)

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Gene Identifier
AT5G15840
Transcript Identifier
AT5G15840.1
Gene Type
Coding gene
Location
5 : 5171343-5172697 : negative

Family

Gene family
HOM03D000235
(450 genes in 31 species)
specific family
Subfamily
ORTHO03D034233
(4 genes in 4 species)
specific family
Duplication type
Tandem duplicate   and   Block duplicate

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Descriptions

Description
B-box type zinc finger protein with CCT domain
Curated Summary
Encodes a protein showing similarities to zinc finger transcription factors, involved in regulation of flowering under long days. Acts upstream of FT and SOC1.
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Identifiers

Identifier Name
aliasBBX1
aliasCO
aliasFG
aliasB-box domain protein 1
aliasCONSTANS
uniprotQ39057

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Biological Process

GO termEvidence(s)ProviderDescriptionSource
GO:0007623IGIGene Ontologycircadian rhythm1
GO:0009909IMPUniProtregulation of flower development1 2 3 4 5 6 7 8 9 10
GO:0010018IMPUniProtfar-red light signaling pathway1 2 3 4 5 6 7 8 9 10
GO:0010218IMPGene Ontologyresponse to far red light1
GO:0006281RCAGene OntologyDNA repair1
GO:0010100RCAGene Ontologynegative regulation of photomorphogenesis1
GO:0048608RCAGene Ontologyreproductive structure development1
GO:0030154IEAUniProtcell differentiation1 2 3 4 5 6 7 8 9
GO:0009908IEAUniProtflower development1 2 3 4 5 6 7 8 9
GO:0006351IEAUniProttranscription, DNA-templated1 2 3 4 5 6 7 8 9

Molecular Function

GO termEvidence(s)ProviderDescriptionSource
GO:0008270IEA, ISSUniProtzinc ion binding1 2 3 4 5 6 7 8 9 10
GO:0003700ISSUniProtsequence-specific DNA binding transcription factor activity1 2 3 4 5 6 7 8 9 10
GO:0005515IPI, IEAGene Ontologyprotein binding1
GO:0003677IEAUniProtDNA binding1 2 3 4 5 6 7 8 9
GO:0043169IEAPLAZA Homologycation bindingHOM03D000235
GO:0046914IEAPLAZA Homologytransition metal ion bindingHOM03D000235
GO:0046872IEAPLAZA Homologymetal ion bindingHOM03D000235

Cellular Component

GO termEvidence(s)ProviderDescriptionSource
GO:0005634IDA, ISMNAS, UniProtnucleus1 2 3 4 5 6 7 8 9 10 11 12
GO:0005622IEAInterProintracellular
GO:0044464IEAPLAZA Homologycell partHOM03D000235
GO:0005623IEAPLAZA HomologycellHOM03D000235

Color Legend

Experimental Evidence
Electronic Evidence
Computational Reviewed Evidence
GO Sources:   Primary     Orthology     Homology  
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InterPro Description
IPR010402CCT domain
IPR000315Zinc finger, B-box

Mapman id Description
33.99development.unspecified
No SignalP domains detected for this gene.
DatabaseType
PlnTFDBC2C2-CO-like
PlantTFDBCO-like