Gene: AT5G13000 (Arabidopsis thaliana)

Overview top

Gene Identifier
AT5G13000
Transcript Identifier
AT5G13000.1
Gene Type
Coding gene
Location
5 : 4110445-4121202 : negative

Family

Gene family
HOM03D000192
(542 genes in 31 species)
specific family
Subfamily
ORTHO03D000550
(78 genes in 20 species)
specific family
Duplication type
Block duplicate

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Descriptions

Description
glucan synthase-like 12
Curated Summary
encodes a gene similar to callose synthase
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Identifiers

Identifier Name
aliasgsl12
aliasCALS3
aliascallose synthase 3
aliasATGSL12
aliasglucan synthase-like 12
aliasGSL12
uniprotQ9LXT9

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Biological Process

GO termEvidence(s)ProviderDescriptionSource
GO:0006075IEA, ISSUniProt(1->3)-beta-D-glucan biosynthetic process1 2 3 4
GO:0000226RCAGene Ontologymicrotubule cytoskeleton organization1
GO:0000911RCAGene Ontologycytokinesis by cell plate formation1
GO:0006346RCAGene Ontologymethylation-dependent chromatin silencing1
GO:0007267RCAGene Ontologycell-cell signaling1
GO:0009556RCAGene Ontologymicrosporogenesis1
GO:0009616RCAGene Ontologyvirus induced gene silencing1
GO:0010267RCAGene Ontologyproduction of ta-siRNAs involved in RNA interference1
GO:0016246RCAGene OntologyRNA interference1
GO:0031048RCAGene Ontologychromatin silencing by small RNA1
GO:0035196RCAGene Ontologyproduction of miRNAs involved in gene silencing by miRNA1
GO:0051567RCAGene Ontologyhistone H3-K9 methylation1
GO:0052543RCAGene Ontologycallose deposition in cell wall1
GO:0008360IEAUniProtregulation of cell shape1 2 3
GO:0044264IEAPLAZA Homologycellular polysaccharide metabolic processHOM03D000192
GO:0044262IEAPLAZA Homologycellular carbohydrate metabolic processHOM03D000192
GO:0016051IEAPLAZA Homologycarbohydrate biosynthetic processHOM03D000192
GO:0044711IEAPLAZA Homologysingle-organism biosynthetic processHOM03D000192
GO:0033692IEAPLAZA Homologycellular polysaccharide biosynthetic processHOM03D000192
GO:0005976IEAPLAZA Homologypolysaccharide metabolic processHOM03D000192
GO:0005975IEAPLAZA Homologycarbohydrate metabolic processHOM03D000192
GO:0034637IEAPLAZA Homologycellular carbohydrate biosynthetic processHOM03D000192
GO:0044723IEAPLAZA Homologysingle-organism carbohydrate metabolic processHOM03D000192
GO:0051274IEAPLAZA Homologybeta-glucan biosynthetic processHOM03D000192
GO:0051273IEAPLAZA Homologybeta-glucan metabolic processHOM03D000192
GO:0006074IEAPLAZA Homology(1->3)-beta-D-glucan metabolic processHOM03D000192
GO:0006073IEAPLAZA Homologycellular glucan metabolic processHOM03D000192
GO:0009250IEAPLAZA Homologyglucan biosynthetic processHOM03D000192
GO:0044042IEAPLAZA Homologyglucan metabolic processHOM03D000192
GO:0000271IEAPLAZA Homologypolysaccharide biosynthetic processHOM03D000192

Molecular Function

GO termEvidence(s)ProviderDescriptionSource
GO:0003843IEA, ISSUniProt1,3-beta-D-glucan synthase activity1 2 3 4
GO:0016757ISSGene Ontologytransferase activity, transferring glycosyl groups1
GO:0016758IEAPLAZA Homologytransferase activity, transferring hexosyl groupsHOM03D000192
GO:0008194IEAPLAZA HomologyUDP-glycosyltransferase activityHOM03D000192
GO:0035251IEAPLAZA HomologyUDP-glucosyltransferase activityHOM03D000192
GO:0046527IEAPLAZA Homologyglucosyltransferase activityHOM03D000192
GO:0016740IEAPLAZA Homologytransferase activityHOM03D000192

Cellular Component

GO termEvidence(s)ProviderDescriptionSource
GO:0000148IEA, ISSUniProt1,3-beta-D-glucan synthase complex1 2 3 4
GO:0005886IDA, ISMGene Ontologyplasma membrane1 2
GO:0016020IEAInterPromembrane
GO:0016021IEAUniProtintegral to membrane1 2 3
GO:0009506ISOPLAZA Tree-based OrthologyplasmodesmaAT1G05570
GO:0009504ISOPLAZA Tree-based Orthologycell plateAT1G05570
GO:0044459IEAPLAZA Homologyplasma membrane partHOM03D000192
GO:0032991IEAPLAZA Homologymacromolecular complexHOM03D000192
GO:0043234IEAPLAZA Homologyprotein complexHOM03D000192
GO:0044425IEAPLAZA Homologymembrane partHOM03D000192
GO:0071944IEAPLAZA Homologycell peripheryHOM03D000192
GO:1902494IEAPLAZA Homologycatalytic complexHOM03D000192
GO:1990234IEAPLAZA Homologytransferase complexHOM03D000192

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Experimental Evidence
Electronic Evidence
Computational Reviewed Evidence
GO Sources:   Primary     Orthology     Homology  
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InterPro Description
IPR023175Vacuolar protein sorting-associate protein Vta1/Callose synthase, N-terminal domain
IPR003440Glycosyl transferase, family 48
IPR0268991,3-beta-glucan synthase subunit FKS1-like, domain-1
IPR026953Callose synthase

Mapman id Description
3.6minor CHO metabolism.callose
No SignalP domains detected for this gene.