Gene: AT5G05560 (Arabidopsis thaliana)

Overview top

Gene Identifier
AT5G05560
Transcript Identifier
AT5G05560.1
Gene Type
Coding gene
Location
5 : 1641452-1654685 : positive

Family

Gene family
HOM03D003910
(48 genes in 29 species)
specific family
Subfamily
ORTHO03D014872
(13 genes in 12 species)
specific family

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Descriptions

Description
E3 ubiquitin ligase, putative
Curated Summary
Encodes a subunit of the Arabidopsis thaliana E3 ubiquitin ligase complex that plays a synergistic role with APC4 both in female gametogenesis and in embryogenesis.
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Identifiers

Identifier Name
aliasEMBRYO DEFECTIVE 2771
aliasanaphase promoting complex 1
aliasEMB2771
aliasAPC1
uniprotQ9FFF9

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Biological Process

GO termEvidence(s)ProviderDescriptionSource
GO:0006511TASGene Ontologyubiquitin-dependent protein catabolic process1
GO:0006302RCAGene Ontologydouble-strand break repair1
GO:0006312RCAGene Ontologymitotic recombination1
GO:0007062RCAGene Ontologysister chromatid cohesion1
GO:0007129RCAGene Ontologysynapsis1
GO:0007131RCAGene Ontologyreciprocal meiotic recombination1
GO:0007276RCAGene Ontologygamete generation1
GO:0032875RCAGene Ontologyregulation of DNA endoreduplication1
GO:0042023RCAGene OntologyDNA endoreduplication1
GO:0042138RCAGene Ontologymeiotic DNA double-strand break formation1
GO:0043161RCAGene Ontologyproteasome-mediated ubiquitin-dependent protein catabolic process1
GO:0043248RCAGene Ontologyproteasome assembly1
GO:0045132RCAGene Ontologymeiotic chromosome segregation1
GO:0051302RCAGene Ontologyregulation of cell division1
GO:0051510RCAGene Ontologyregulation of unidimensional cell growth1
GO:0051788RCAGene Ontologyresponse to misfolded protein1
GO:0009553IMPUniProtembryo sac development1 2
GO:0009793IMPUniProtembryo development ending in seed dormancy1 2
GO:0010252IMPUniProtauxin homeostasis1 2
GO:0048481IMPUniProtovule development1 2
GO:0051301IEAUniProtcell division1
GO:0007067IEAUniProtmitosis1
GO:0016567IEAUniProtprotein ubiquitination1

Molecular Function

GO termEvidence(s)ProviderDescriptionSource
GO:0004842ISSGene Ontologyubiquitin-protein ligase activity1

Cellular Component

GO termEvidence(s)ProviderDescriptionSource
GO:0005634ISMGene Ontologynucleus1
GO:0000151TASGene Ontologyubiquitin ligase complex1
GO:0005680IEAUniProtanaphase-promoting complex1

Color Legend

Experimental Evidence
Electronic Evidence
Computational Reviewed Evidence
GO Sources:   Primary     Orthology     Homology  
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InterPro Description
IPR024990Anaphase-promoting complex subunit 1

Mapman id Description
29.5.11.4.4protein.degradation.ubiquitin.E3.APC
No SignalP domains detected for this gene.