Gene: AT5G04140 (Arabidopsis thaliana)

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Gene Identifier
AT5G04140
Transcript Identifier
AT5G04140.2
Gene Type
Coding gene
Location
5 : 1130031-1138186 : positive

Family

Gene family
HOM03D001597
(102 genes in 30 species)
specific family

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Descriptions

Description
glutamate synthase 1
Curated Summary
Encodes a gene whose sequence is similar to ferredoxin dependent glutamate synthase (Fd-GOGAT). Expression in leaves is induced by light and sucrose. Proposed to be involved in photorespiration and nitrogen assimilation.
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Identifiers

Identifier Name
aliasglutamate synthase 1
aliasFD-GOGAT
aliasFERREDOXIN-DEPENDENT GLUTAMATE SYNTHASE 1
aliasGLU1
aliasGLUS
aliasGLS1
aliasFERREDOXIN-DEPENDENT GLUTAMATE SYNTHASE
uniprotQ9ZNZ7

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Biological Process

GO termEvidence(s)ProviderDescriptionSource
GO:0009416IEPUniProtresponse to light stimulus1 2 3 4 5 6 7 8
GO:0009853IMP, TAS, UniProtphotorespiration1 2 3 4 5 6 7 8 9
GO:0080114IDAUniProtpositive regulation of glycine hydroxymethyltransferase activity1 2 3 4 5 6 7 8
GO:0006833RCAGene Ontologywater transport1
GO:0009409RCAGene Ontologyresponse to cold1
GO:0009637RCAGene Ontologyresponse to blue light1
GO:0009644RCAGene Ontologyresponse to high light intensity1
GO:0009651RCAGene Ontologyresponse to salt stress1
GO:0009658RCAGene Ontologychloroplast organization1
GO:0009697RCAGene Ontologysalicylic acid biosynthetic process1
GO:0009744IEP, RCA, UniProtresponse to sucrose1 2 3 4 5 6 7 8 9
GO:0009750RCAGene Ontologyresponse to fructose1
GO:0009814RCAGene Ontologydefense response, incompatible interaction1
GO:0009902RCAGene Ontologychloroplast relocation1
GO:0010103RCAGene Ontologystomatal complex morphogenesis1
GO:0010114RCAGene Ontologyresponse to red light1
GO:0010155RCAGene Ontologyregulation of proton transport1
GO:0010218RCAGene Ontologyresponse to far red light1
GO:0016117RCAGene Ontologycarotenoid biosynthetic process1
GO:0019684RCAGene Ontologyphotosynthesis, light reaction1
GO:0042742RCAGene Ontologydefense response to bacterium1
GO:0048481RCAGene Ontologyovule development1
GO:0006807IEAInterPronitrogen compound metabolic process
GO:0006537IEAInterProglutamate biosynthetic process
GO:0008152IEAInterPrometabolic process
GO:0055114IEAInterProoxidation-reduction process
GO:0006541IEAUniProtglutamine metabolic process1 2 3 4 5 6 7
GO:0097054IEAUniProtL-glutamate biosynthetic process1 2 3 4 5 6 7

Molecular Function

GO termEvidence(s)ProviderDescriptionSource
GO:0005515IPIGene Ontologyprotein binding1
GO:0016041IDA, ISS, UniProtglutamate synthase (ferredoxin) activity1 2 3 4 5 6 7 8 9
GO:0016491IEAInterProoxidoreductase activity
GO:0016638IEAInterProoxidoreductase activity, acting on the CH-NH2 group of donors
GO:0003824IEAInterProcatalytic activity
GO:0015930IEAInterProglutamate synthase activity
GO:0051538IEAUniProt3 iron, 4 sulfur cluster binding1 2 3 4 5 6 7
GO:0046872IEAUniProtmetal ion binding1 2 3 4 5 6 7

Cellular Component

GO termEvidence(s)ProviderDescriptionSource
GO:0009507IDA, ISMGene Ontologychloroplast1 2
GO:0009941IDAUniProtchloroplast envelope1 2 3 4 5 6 7 8
GO:0009570IDAUniProtchloroplast stroma1 2 3 4 5 6 7 8
GO:0016020IDAUniProtmembrane1 2 3 4 5 6 7 8
GO:0048046IDAUniProtapoplast1 2 3 4 5 6 7 8
GO:0005739IDAUniProtmitochondrion1 2 3 4 5 6 7 8
GO:0005759IEAUniProtmitochondrial matrix1 2 3 4 5 6 7

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Experimental Evidence
Electronic Evidence
Computational Reviewed Evidence
GO Sources:   Primary     Orthology     Homology  
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InterPro Description
IPR002489Glutamate synthase, alpha subunit, C-terminal
IPR002932Glutamate synthase, central-C
IPR006982Glutamate synthase, central-N
IPR013785Aldolase-type TIM barrel
IPR000583Class II glutamine amidotransferase domain
IPR017932Glutamine amidotransferase type 2 domain

Mapman id Description
12.2.1.1N-metabolism.ammonia metabolism.glutamate synthase.ferredoxin dependent
No SignalP domains detected for this gene.