Gene: AT5G01270 (Arabidopsis thaliana)

Overview top

Gene Identifier
AT5G01270
Transcript Identifier
AT5G01270.2
Gene Type
Coding gene
Location
5 : 107943-112143 : negative

Family

Gene family
HOM03D001948
(87 genes in 31 species)
specific family
Subfamily
ORTHO03D002475
(41 genes in 26 species)
specific family

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Descriptions

Description
carboxyl-terminal domain (ctd) phosphatase-like 2
Curated Summary
Encodes CPL2, a carboxyl-terminal domain (CTD) phosphatase that dephosphorylates CTD Ser5-PO4 of the RNA polymerase II complex. Regulates plant growth, stress and auxin responses.
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Identifiers

Identifier Name
aliascarboxyl-terminal domain (ctd) phosphatase-like 2
aliasATCPL2
aliasCPL2
uniprotQ5YDB5

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Biological Process

GO termEvidence(s)ProviderDescriptionSource
GO:0006970IMPGene Ontologyresponse to osmotic stress1
GO:0009733IMPGene Ontologyresponse to auxin1
GO:0009734IMPUniProtauxin mediated signaling pathway1 2 3 4 5
GO:0045893IMPUniProtpositive regulation of transcription, DNA-dependent1 2 3 4 5
GO:0048589IMPGene Ontologydevelopmental growth1
GO:0007275IEAUniProtmulticellular organismal development1 2 3 4
GO:0006351IEAUniProttranscription, DNA-templated1 2 3 4

Molecular Function

GO termEvidence(s)ProviderDescriptionSource
GO:0003725ISSGene Ontologydouble-stranded RNA binding1
GO:0004647IDAUniProtphosphoserine phosphatase activity1 2 3 4 5
GO:0016791IDAGene Ontologyphosphatase activity1
GO:0005515IEAInterProprotein binding
GO:0046872IEAUniProtmetal ion binding1 2 3 4
GO:0004721IEAUniProtphosphoprotein phosphatase activity1 2 3 4
GO:0003723IEAUniProtRNA binding1 2 3 4

Cellular Component

GO termEvidence(s)ProviderDescriptionSource
GO:0005634IEA, ISMUniProtnucleus1 2 3 4 5
GO:0005737IEAUniProtcytoplasm1 2 3 4

Color Legend

Experimental Evidence
Electronic Evidence
Computational Reviewed Evidence
GO Sources:   Primary     Orthology     Homology  
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InterPro Description
IPR004274NLI interacting factor
IPR023214HAD-like domain
IPR014720Double-stranded RNA-binding domain

Mapman id Description
27.4RNA.RNA binding
No SignalP domains detected for this gene.