Gene: AT4G36930 (Arabidopsis thaliana)

Overview top

Gene Identifier
AT4G36930
Transcript Identifier
AT4G36930.1
Gene Type
Coding gene
Location
4 : 17414167-17415945 : positive

Family

Gene family
HOM03D000046
(1586 genes in 29 species)
specific family
Subfamily
ORTHO03D008301
(30 genes in 25 species)
specific family
Duplication type
Block duplicate

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Descriptions

Description
basic helix-loop-helix (bHLH) DNA-binding superfamily protein
Curated Summary
Encodes a transcription factor of the bHLH protein family. Mutants have abnormal, unfused carpels and reduced seed dormancy.
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Identifiers

Identifier Name
aliasSPATULA
aliasSPT
uniprotQ9FUA4

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Biological Process

GO termEvidence(s)ProviderDescriptionSource
GO:0009908NASGene Ontologyflower development1
GO:0009409IMPUniProtresponse to cold1 2 3 4 5 6 7 8 9
GO:0010114IMPUniProtresponse to red light1 2 3 4 5 6 7 8 9
GO:0010187IMPUniProtnegative regulation of seed germination1 2 3 4 5 6 7 8 9
GO:0010154IMPUniProtfruit development1 2 3 4 5 6 7 8 9
GO:0048440IMPUniProtcarpel development1 2 3 4 5 6 7 8 9
GO:0007623IEPUniProtcircadian rhythm1 2 3 4 5 6 7 8 9
GO:0006351IEAUniProttranscription, DNA-templated1 2 3 4 5 6 7 8

Molecular Function

GO termEvidence(s)ProviderDescriptionSource
GO:0003677IEA, ISSUniProtDNA binding1 2 3 4 5 6 7 8 9
GO:0003700ISS, TAS, UniProtsequence-specific DNA binding transcription factor activity1 2 3 4 5 6 7 8 9 10
GO:0005515IPIGene Ontologyprotein binding1
GO:0046983IEAInterProprotein dimerization activity
GO:0005488IEAPLAZA HomologybindingHOM03D000046

Cellular Component

GO termEvidence(s)ProviderDescriptionSource
GO:0005634IDA, ISM, UniProtnucleus1 2 3 4 5 6 7 8 9 10

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Experimental Evidence
Electronic Evidence
Computational Reviewed Evidence
GO Sources:   Primary     Orthology     Homology  
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InterPro Description
IPR011598Myc-type, basic helix-loop-helix (bHLH) domain

Mapman id Description
27.3.6RNA.regulation of transcription.bHLH,Basic Helix-Loop-Helix family
No SignalP domains detected for this gene.

Binding sites bound by this Transcription Factor

Binding siteNameDescriptionCounts
Matrix_332SPT;ALCNot available5308 genes in 10 species

View full overview
DatabaseType
PlnTFDBbHLH
PlantTFDBbHLH