Gene: AT4G30950 (Arabidopsis thaliana)

Overview top

Gene Identifier
AT4G30950
Transcript Identifier
AT4G30950.1
Gene Type
Coding gene
Location
4 : 15057278-15059673 : negative

Family

Gene family
HOM03D004136
(46 genes in 30 species)
specific family

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Descriptions

Description
fatty acid desaturase 6
Curated Summary
Chloroplastic enzyme responsible for the synthesis of 16:2 and 18:2 fatty acids from galactolipids, sulpholipids and phosphatidylglycerol. Uses ferredoxin as electron donor. Gene mutation resulted in reduced level of unsaturated fatty acids leading to susceptibility to photoinhibition.
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Identifiers

Identifier Name
aliasSFD4
aliasSTEAROYL DESATURASE DEFICIENCY 4
aliasFADC
aliasfatty acid desaturase 6
aliasFATTY ACID DESATURASE C
aliasFAD6
uniprotP46312

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Biological Process

GO termEvidence(s)ProviderDescriptionSource
GO:0010205IMPUniProtphotoinhibition1 2 3 4 5
GO:0006633TASUniProtfatty acid biosynthetic process1 2 3 4 5
GO:0000096RCAGene Ontologysulfur amino acid metabolic process1
GO:0006546RCAGene Ontologyglycine catabolic process1
GO:0006636IEA, RCAUniProtunsaturated fatty acid biosynthetic process1 2 3 4 5
GO:0006655RCAGene Ontologyphosphatidylglycerol biosynthetic process1
GO:0006733RCAGene Ontologyoxidoreduction coenzyme metabolic process1
GO:0006766RCAGene Ontologyvitamin metabolic process1
GO:0008652RCAGene Ontologycellular amino acid biosynthetic process1
GO:0009072RCAGene Ontologyaromatic amino acid family metabolic process1
GO:0009106RCAGene Ontologylipoate metabolic process1
GO:0009108RCAGene Ontologycoenzyme biosynthetic process1
GO:0009117RCAGene Ontologynucleotide metabolic process1
GO:0009416RCAGene Ontologyresponse to light stimulus1
GO:0009695RCAGene Ontologyjasmonic acid biosynthetic process1
GO:0015994RCAGene Ontologychlorophyll metabolic process1
GO:0015995RCAGene Ontologychlorophyll biosynthetic process1
GO:0016117RCAGene Ontologycarotenoid biosynthetic process1
GO:0019216RCAGene Ontologyregulation of lipid metabolic process1
GO:0019288RCAGene Ontologyisopentenyl diphosphate biosynthetic process, methylerythritol 4-phosphate pathway1
GO:0019684RCAGene Ontologyphotosynthesis, light reaction1
GO:0019748RCAGene Ontologysecondary metabolic process1
GO:0031408RCAGene Ontologyoxylipin biosynthetic process1
GO:0035304RCAGene Ontologyregulation of protein dephosphorylation1
GO:0044272RCAGene Ontologysulfur compound biosynthetic process1
GO:0006629IEAInterProlipid metabolic process

Molecular Function

GO termEvidence(s)ProviderDescriptionSource
GO:0045485IGIGene Ontologyomega-6 fatty acid desaturase activity1
GO:0016491IEAUniProtoxidoreductase activity1 2 3 4

Cellular Component

GO termEvidence(s)ProviderDescriptionSource
GO:0009507IDA, ISM, NASGene Ontologychloroplast1 2 3
GO:0009941IDAUniProtchloroplast envelope1 2 3 4 5
GO:0009706IEAUniProtchloroplast inner membrane1 2 3 4
GO:0016021IEAUniProtintegral to membrane1 2 3 4

Color Legend

Experimental Evidence
Electronic Evidence
Computational Reviewed Evidence
GO Sources:   Primary     Orthology     Homology  
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InterPro Description
IPR005804Fatty acid desaturase, type 1

Mapman id Description
11.2.4lipid metabolism.FA desaturation.omega 6 desaturase
No SignalP domains detected for this gene.