Gene: AT4G28620 (Arabidopsis thaliana)

Overview top

Gene Identifier
AT4G28620
Transcript Identifier
AT4G28620.1
Gene Type
Coding gene
Location
4 : 14135526-14137953 : negative

Family

Gene family
HOM03D000078
(1155 genes in 31 species)
specific family
Subfamily
ORTHO03D010577
(25 genes in 13 species)
specific family
Duplication type
Tandem duplicate

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Descriptions

Description
ABC transporter of the mitochondrion 2
Curated Summary
Half-molecule ABC transporter ATM2. Arabidopsis thaliana has three ATM genes, namely ATM1, ATM2 and ATM3. Only ATM3 has an important function for plant growth.
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Identifiers

Identifier Name
aliasATM2
aliasATP-binding cassette B24
aliasABC transporter of the mitochondrion 2
aliasARABIDOPSIS THALIANA ABC TRANSPORTER OF THE MITOCHONDRION 2
aliasATATM2
aliasABCB24
uniprotQ9M0G9

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Biological Process

GO termEvidence(s)ProviderDescriptionSource
GO:0006200IBAGene OntologyATP catabolic process1
GO:0006879ISS, IBAUniProtcellular iron ion homeostasis1 2 3 4 5 6 7 8 9
GO:0055085IBA, IEAGene Ontologytransmembrane transport1
GO:0046686NASUniProtresponse to cadmium ion1 2 3 4 5 6 7 8 9
GO:0006810IEAInterProtransport
GO:0006811IEAUniProtion transport1 2 3 4 5 6 7 8
GO:0044765IEAPLAZA Homologysingle-organism transportHOM03D000078
GO:0044763IEAPLAZA Homologysingle-organism cellular processHOM03D000078
GO:0051234IEAPLAZA Homologyestablishment of localizationHOM03D000078
GO:0009987IEAPLAZA Homologycellular processHOM03D000078
GO:0044699IEAPLAZA Homologysingle-organism processHOM03D000078
GO:0051179IEAPLAZA HomologylocalizationHOM03D000078

Molecular Function

GO termEvidence(s)ProviderDescriptionSource
GO:0005215ISSGene Ontologytransporter activity1
GO:0042626IBA, ISSIEA, UniProtATPase activity, coupled to transmembrane movement of substances1 2 3 4 5 6 7 8 9 10
GO:0017111IEAInterPronucleoside-triphosphatase activity
GO:0000166IEAInterPronucleotide binding
GO:0016887IEAInterProATPase activity
GO:0005524IEAUniProtATP binding1 2 3 4 5 6 7 8
GO:0032555IEAPLAZA Homologypurine ribonucleotide bindingHOM03D000078
GO:0016817IEAPLAZA Homologyhydrolase activity, acting on acid anhydridesHOM03D000078
GO:0043168IEAPLAZA Homologyanion bindingHOM03D000078
GO:0032553IEAPLAZA Homologyribonucleotide bindingHOM03D000078
GO:0042623IEAPLAZA HomologyATPase activity, coupledHOM03D000078
GO:0043167IEAPLAZA Homologyion bindingHOM03D000078
GO:0035639IEAPLAZA Homologypurine ribonucleoside triphosphate bindingHOM03D000078
GO:0097367IEAPLAZA Homologycarbohydrate derivative bindingHOM03D000078
GO:0003824IEAPLAZA Homologycatalytic activityHOM03D000078
GO:0022804IEAPLAZA Homologyactive transmembrane transporter activityHOM03D000078
GO:0016818IEAPLAZA Homologyhydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydridesHOM03D000078
GO:0032559IEAPLAZA Homologyadenyl ribonucleotide bindingHOM03D000078
GO:1901265IEAPLAZA Homologynucleoside phosphate bindingHOM03D000078
GO:0016462IEAPLAZA Homologypyrophosphatase activityHOM03D000078
GO:0001882IEAPLAZA Homologynucleoside bindingHOM03D000078
GO:0030554IEAPLAZA Homologyadenyl nucleotide bindingHOM03D000078
GO:0016820IEAPLAZA Homologyhydrolase activity, acting on acid anhydrides, catalyzing transmembrane movement of substancesHOM03D000078
GO:0017076IEAPLAZA Homologypurine nucleotide bindingHOM03D000078
GO:0097159IEAPLAZA Homologyorganic cyclic compound bindingHOM03D000078
GO:0015399IEAPLAZA Homologyprimary active transmembrane transporter activityHOM03D000078
GO:0015405IEAPLAZA HomologyP-P-bond-hydrolysis-driven transmembrane transporter activityHOM03D000078
GO:0022857IEAPLAZA Homologytransmembrane transporter activityHOM03D000078
GO:0036094IEAPLAZA Homologysmall molecule bindingHOM03D000078
GO:0032549IEAPLAZA Homologyribonucleoside bindingHOM03D000078
GO:0016787IEAPLAZA Homologyhydrolase activityHOM03D000078
GO:0005488IEAPLAZA HomologybindingHOM03D000078
GO:1901363IEAPLAZA Homologyheterocyclic compound bindingHOM03D000078
GO:0001883IEAPLAZA Homologypurine nucleoside bindingHOM03D000078
GO:0032550IEAPLAZA Homologypurine ribonucleoside bindingHOM03D000078
GO:0043492IEAPLAZA HomologyATPase activity, coupled to movement of substancesHOM03D000078

Cellular Component

GO termEvidence(s)ProviderDescriptionSource
GO:0005739IDA, ISMGene Ontologymitochondrion1 2
GO:0005743IBAUniProtmitochondrial inner membrane1 2 3 4 5 6 7 8 9
GO:0016021IBA, IEA, UniProtintegral to membrane1 2 3 4 5 6 7 8 9
GO:0031224IEAPLAZA Homologyintrinsic to membraneHOM03D000078
GO:0016020IEAPLAZA HomologymembraneHOM03D000078
GO:0044425IEAPLAZA Homologymembrane partHOM03D000078

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Experimental Evidence
Electronic Evidence
Computational Reviewed Evidence
GO Sources:   Primary     Orthology     Homology  
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InterPro Description
IPR003593AAA+ ATPase domain
IPR017871ABC transporter, conserved site
IPR027417P-loop containing nucleoside triphosphate hydrolase
IPR003439ABC transporter-like
IPR011527ABC transporter type 1, transmembrane domain
IPR001140ABC transporter, transmembrane domain

Mapman id Description
34.16transport.ABC transporters and multidrug resistance systems
No SignalP domains detected for this gene.