Gene: AT4G28250 (Arabidopsis thaliana)

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Gene Identifier
AT4G28250
Transcript Identifier
AT4G28250.1
Gene Type
Coding gene
Location
4 : 14000446-14001945 : negative

Family

Gene family
HOM03D000073
(1206 genes in 30 species)
specific family
Subfamily
ORTHO03D002921
(39 genes in 28 species)
specific family
Duplication type
Block duplicate

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Descriptions

Description
expansin B3
Curated Summary
putative beta-expansin/allergen protein. Naming convention from the Expansin Working Group (Kende et al, 2004. Plant Mol Bio). Involved in the formation of nematode-induced syncytia in roots of Arabidopsis thaliana.
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Identifiers

Identifier Name
aliasexpansin B3
aliasATEXPB3
aliasEXPB3
aliasATHEXP BETA 1.6
uniprotQ9M0I2

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Biological Process

GO termEvidence(s)ProviderDescriptionSource
GO:0009664ISSGene Ontologyplant-type cell wall organization1
GO:0009826ISS, NASGene Ontologyunidimensional cell growth1 2
GO:0009828ISS, NASGene Ontologyplant-type cell wall loosening1 2
GO:0006949IEPUniProtsyncytium formation1 2 3 4
GO:0019953IEAUniProtsexual reproduction1 2 3
GO:0071669IEAPLAZA Homologyplant-type cell wall organization or biogenesisHOM03D000073
GO:0071555IEAPLAZA Homologycell wall organizationHOM03D000073
GO:0045229IEAPLAZA Homologyexternal encapsulating structure organizationHOM03D000073
GO:0071554IEAPLAZA Homologycell wall organization or biogenesisHOM03D000073
GO:0071840IEAPLAZA Homologycellular component organization or biogenesisHOM03D000073
GO:0016043IEAPLAZA Homologycellular component organizationHOM03D000073

Cellular Component

GO termEvidence(s)ProviderDescriptionSource
GO:0005576IEA, ISMUniProtextracellular region1 2 3 4
GO:0009506IDAUniProtplasmodesma1 2 3 4
GO:0005618IEAUniProtcell wall1 2 3
GO:0016020IEAUniProtmembrane1 2 3

Color Legend

Experimental Evidence
Electronic Evidence
Computational Reviewed Evidence
GO Sources:   Primary     Orthology     Homology  
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InterPro Description
IPR007117Expansin, cellulose-binding-like domain
IPR014733Barwin-like endoglucanase
IPR007118Expansin/Lol pI
IPR005795Major pollen allergen Lol pI
IPR007112Expansin/pollen allergen, DPBB domain
IPR009009RlpA-like double-psi beta-barrel domain

Mapman id Description
10.7cell wall.modification
SignalP Description
SignalP-noTMSignal Peptide detected using noTM network