Gene: AT4G26150 (Arabidopsis thaliana)

Overview top

Gene Identifier
AT4G26150
Transcript Identifier
AT4G26150.1
Gene Type
Coding gene
Location
4 : 13253210-13254659 : positive

Family

Gene family
HOM03D000158
(654 genes in 31 species)
specific family
Subfamily
ORTHO03D023029
(6 genes in 6 species)
specific family
Duplication type
Block duplicate

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Descriptions

Description
cytokinin-responsive gata factor 1
Curated Summary
Encodes a member of the GATA factor family of zinc finger transcription factors. Modulate chlorophyll biosynthesis and glutamate synthase (GLU1/Fd-GOGAT) expression.
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Identifiers

Identifier Name
aliasCGA1
aliascytokinin-responsive gata factor 1
aliasGATA TRANSCRIPTION FACTOR 22
aliasGNC-LIKE
aliasGATA22
aliasGNL
uniprotQ9SZI6

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Biological Process

GO termEvidence(s)ProviderDescriptionSource
GO:0009735IEPUniProtresponse to cytokinin1 2 3
GO:0007623IEPUniProtcircadian rhythm1 2 3
GO:0009416IEPUniProtresponse to light stimulus1 2 3
GO:0009740IEPUniProtgibberellic acid mediated signaling pathway1 2 3
GO:0009910IMPUniProtnegative regulation of flower development1 2 3
GO:0010187IEPUniProtnegative regulation of seed germination1 2 3
GO:0010380IMPUniProtregulation of chlorophyll biosynthetic process1 2 3
GO:0010468IDAGene Ontologyregulation of gene expression1
GO:0006355IEAInterProregulation of transcription, DNA-dependent
GO:0006351IEAUniProttranscription, DNA-templated1 2
GO:0006807IEAPLAZA Homologynitrogen compound metabolic processHOM03D000158
GO:0010467IEAPLAZA Homologygene expressionHOM03D000158
GO:0051252IEAPLAZA Homologyregulation of RNA metabolic processHOM03D000158
GO:0051171IEAPLAZA Homologyregulation of nitrogen compound metabolic processHOM03D000158
GO:0044260IEAPLAZA Homologycellular macromolecule metabolic processHOM03D000158
GO:0019222IEAPLAZA Homologyregulation of metabolic processHOM03D000158
GO:0019219IEAPLAZA Homologyregulation of nucleobase-containing compound metabolic processHOM03D000158
GO:0034641IEAPLAZA Homologycellular nitrogen compound metabolic processHOM03D000158
GO:0034645IEAPLAZA Homologycellular macromolecule biosynthetic processHOM03D000158
GO:0050789IEAPLAZA Homologyregulation of biological processHOM03D000158
GO:0009889IEAPLAZA Homologyregulation of biosynthetic processHOM03D000158
GO:0018130IEAPLAZA Homologyheterocycle biosynthetic processHOM03D000158
GO:0019438IEAPLAZA Homologyaromatic compound biosynthetic processHOM03D000158
GO:0043170IEAPLAZA Homologymacromolecule metabolic processHOM03D000158
GO:0046483IEAPLAZA Homologyheterocycle metabolic processHOM03D000158
GO:0016070IEAPLAZA HomologyRNA metabolic processHOM03D000158
GO:0009987IEAPLAZA Homologycellular processHOM03D000158
GO:0044271IEAPLAZA Homologycellular nitrogen compound biosynthetic processHOM03D000158
GO:0065007IEAPLAZA Homologybiological regulationHOM03D000158
GO:0010556IEAPLAZA Homologyregulation of macromolecule biosynthetic processHOM03D000158
GO:0006139IEAPLAZA Homologynucleobase-containing compound metabolic processHOM03D000158
GO:0032774IEAPLAZA HomologyRNA biosynthetic processHOM03D000158
GO:0006725IEAPLAZA Homologycellular aromatic compound metabolic processHOM03D000158
GO:1901576IEAPLAZA Homologyorganic substance biosynthetic processHOM03D000158
GO:0090304IEAPLAZA Homologynucleic acid metabolic processHOM03D000158
GO:0080090IEAPLAZA Homologyregulation of primary metabolic processHOM03D000158
GO:2001141IEAPLAZA Homologyregulation of RNA biosynthetic processHOM03D000158
GO:0044237IEAPLAZA Homologycellular metabolic processHOM03D000158
GO:0044238IEAPLAZA Homologyprimary metabolic processHOM03D000158
GO:0009058IEAPLAZA Homologybiosynthetic processHOM03D000158
GO:0009059IEAPLAZA Homologymacromolecule biosynthetic processHOM03D000158
GO:2000112IEAPLAZA Homologyregulation of cellular macromolecule biosynthetic processHOM03D000158
GO:0060255IEAPLAZA Homologyregulation of macromolecule metabolic processHOM03D000158
GO:0031323IEAPLAZA Homologyregulation of cellular metabolic processHOM03D000158
GO:1901360IEAPLAZA Homologyorganic cyclic compound metabolic processHOM03D000158
GO:0031326IEAPLAZA Homologyregulation of cellular biosynthetic processHOM03D000158
GO:1901362IEAPLAZA Homologyorganic cyclic compound biosynthetic processHOM03D000158
GO:0034654IEAPLAZA Homologynucleobase-containing compound biosynthetic processHOM03D000158
GO:0050794IEAPLAZA Homologyregulation of cellular processHOM03D000158
GO:0071704IEAPLAZA Homologyorganic substance metabolic processHOM03D000158
GO:0044249IEAPLAZA Homologycellular biosynthetic processHOM03D000158

Molecular Function

GO termEvidence(s)ProviderDescriptionSource
GO:0003700ISS, IEA, UniProtsequence-specific DNA binding transcription factor activity1 2 3
GO:0044212IDAUniProttranscription regulatory region DNA binding1 2 3
GO:0043565IEAUniProtsequence-specific DNA binding1 2
GO:0008270IEAUniProtzinc ion binding1 2
GO:0043169IEAPLAZA Homologycation bindingHOM03D000158
GO:0043167IEAPLAZA Homologyion bindingHOM03D000158
GO:0046914IEAPLAZA Homologytransition metal ion bindingHOM03D000158
GO:0046872IEAPLAZA Homologymetal ion bindingHOM03D000158
GO:0097159IEAPLAZA Homologyorganic cyclic compound bindingHOM03D000158
GO:0003676IEAPLAZA Homologynucleic acid bindingHOM03D000158
GO:0003677IEAPLAZA HomologyDNA bindingHOM03D000158
GO:1901363IEAPLAZA Homologyheterocyclic compound bindingHOM03D000158
GO:0001071IEAPLAZA Homologynucleic acid binding transcription factor activityHOM03D000158

Cellular Component

GO termEvidence(s)ProviderDescriptionSource
GO:0005634IEA, ISMUniProtnucleus1 2 3

Color Legend

Experimental Evidence
Electronic Evidence
Computational Reviewed Evidence
GO Sources:   Primary     Orthology     Homology  
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InterPro Description
IPR013088Zinc finger, NHR/GATA-type
IPR000679Zinc finger, GATA-type

Mapman id Description
27.3.9RNA.regulation of transcription.C2C2(Zn) GATA transcription factor family
No SignalP domains detected for this gene.

Binding sites bound by this Transcription Factor

Binding siteNameDescriptionCounts
Matrix_283GATA15;GATA17;AT4G16141;GATA22;GATA23;GATA16;GNCNot available447 genes in 10 species

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DatabaseType
PlnTFDBC2C2-GATA
PlantTFDBGATA