Gene: AT4G23600 (Arabidopsis thaliana)

Overview top

Gene Identifier
AT4G23600
Transcript Identifier
AT4G23600.1
Gene Type
Coding gene
Location
4 : 12310657-12312885 : positive

Family

Gene family
HOM03D000833
(170 genes in 31 species)
specific family
Duplication type
Tandem duplicate

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Descriptions

Description
Tyrosine transaminase family protein
Curated Summary
Encodes cystine lyase which is expected to be involved in amino acid metabolism, providing the plant with cysteine and the generation of precursors of ethylene biosynthesis. mRNA levels are elevated in response to wounding.
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Identifiers

Identifier Name
aliasJR2
aliasJASMONIC ACID RESPONSIVE 2
aliasCORONATINE INDUCED 1
aliasCORI3
uniprotQ9SUR6

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Biological Process

GO termEvidence(s)ProviderDescriptionSource
GO:0009058IEA, ISSUniProtbiosynthetic process1 2 3 4 5 6 7 8 9 10
GO:0009753IEPUniProtresponse to jasmonic acid1 2 3 4 5 6 7 8 9 10
GO:0010188IEPUniProtresponse to microbial phytotoxin1 2 3 4 5 6 7 8 9 10
GO:0042538TASUniProthyperosmotic salinity response1 2 3 4 5 6 7 8 9 10
GO:0006520IEP, IEA, UniProtcellular amino acid metabolic process1 2 3 4 5 6 7 8 9 10
GO:0009611IEPUniProtresponse to wounding1 2 3 4 5 6 7 8 9 10
GO:0000096RCAGene Ontologysulfur amino acid metabolic process1
GO:0006546RCAGene Ontologyglycine catabolic process1
GO:0006636RCAGene Ontologyunsaturated fatty acid biosynthetic process1
GO:0006733RCAGene Ontologyoxidoreduction coenzyme metabolic process1
GO:0006766RCAGene Ontologyvitamin metabolic process1
GO:0008652RCAGene Ontologycellular amino acid biosynthetic process1
GO:0009072RCAGene Ontologyaromatic amino acid family metabolic process1
GO:0009106RCAGene Ontologylipoate metabolic process1
GO:0009108RCAGene Ontologycoenzyme biosynthetic process1
GO:0009117RCAGene Ontologynucleotide metabolic process1
GO:0009695RCAGene Ontologyjasmonic acid biosynthetic process1
GO:0009965RCAGene Ontologyleaf morphogenesis1
GO:0019288RCAGene Ontologyisopentenyl diphosphate biosynthetic process, methylerythritol 4-phosphate pathway1
GO:0019748RCAGene Ontologysecondary metabolic process1
GO:0019761RCAGene Ontologyglucosinolate biosynthetic process1
GO:0030154RCAGene Ontologycell differentiation1
GO:0044272RCAGene Ontologysulfur compound biosynthetic process1
GO:0045893RCAGene Ontologypositive regulation of transcription, DNA-dependent1
GO:0009737IEPUniProtresponse to abscisic acid1 2 3 4 5 6 7 8 9 10

Molecular Function

GO termEvidence(s)ProviderDescriptionSource
GO:0008483NAS, ISS, IEA, UniProttransaminase activity1 2 3 4 5 6 7 8 9 10 11
GO:0004021IDAGene OntologyL-alanine:2-oxoglutarate aminotransferase activity1
GO:0004069IDAGene OntologyL-aspartate:2-oxoglutarate aminotransferase activity1
GO:0004121IDAUniProtcystathionine beta-lyase activity1 2 3 4 5 6 7 8 9 10
GO:0004838IDAGene OntologyL-tyrosine:2-oxoglutarate aminotransferase activity1
GO:0050362IDAGene OntologyL-tryptophan:2-oxoglutarate aminotransferase activity1
GO:0030170IEAUniProtpyridoxal phosphate binding1 2 3 4 5 6 7 8 9
GO:0003824IEAInterProcatalytic activity
GO:0016769IEAPLAZA Homologytransferase activity, transferring nitrogenous groupsHOM03D000833

Cellular Component

GO termEvidence(s)ProviderDescriptionSource
GO:0005737ISMGene Ontologycytoplasm1
GO:0005773IDAUniProtvacuole1 2 3 4 5 6 7 8 9 10
GO:0048046IDAUniProtapoplast1 2 3 4 5 6 7 8 9 10

Color Legend

Experimental Evidence
Electronic Evidence
Computational Reviewed Evidence
GO Sources:   Primary     Orthology     Homology  
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InterPro Description
IPR015422Pyridoxal phosphate-dependent transferase, major region, subdomain 2
IPR015421Pyridoxal phosphate-dependent transferase, major region, subdomain 1
IPR005958Tyrosine/nicotianamine aminotransferase
IPR004839Aminotransferase, class I/classII
IPR015424Pyridoxal phosphate-dependent transferase

Mapman id Description
13.1.3.4.2amino acid metabolism.synthesis.aspartate family.methionine.cystathionine beta-lyase
No SignalP domains detected for this gene.