Gene: AT4G18020 (Arabidopsis thaliana)

Overview top

Gene Identifier
AT4G18020
Transcript Identifier
AT4G18020.1
Gene Type
Coding gene
Location
4 : 10003738-10006682 : negative

Family

Gene family
HOM03D004428
(44 genes in 25 species)
specific family

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Descriptions

Description
CheY-like two-component responsive regulator family protein
Curated Summary
Encodes pseudo-response regulator 2 (APRR2) that interacts with a calcium sensor (CML9).
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Identifiers

Identifier Name
aliasPSEUDO-RESPONSE REGULATOR 2
aliasPRR2
aliasAPRR2
uniprotQ6LA43

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Biological Process

GO termEvidence(s)ProviderDescriptionSource
GO:0007623RCA, TASGene Ontologycircadian rhythm1 2
GO:0009736RCAGene Ontologycytokinin-activated signaling pathway1
GO:0006355IEAInterProregulation of transcription, DNA-dependent
GO:0000160IEAInterProphosphorelay signal transduction system
GO:0035556IEAUniProtintracellular signal transduction1 2 3
GO:0006351IEAUniProttranscription, DNA-templated1 2 3
GO:2001141IEAPLAZA Homologyregulation of RNA biosynthetic processHOM03D004428

Molecular Function

GO termEvidence(s)ProviderDescriptionSource
GO:0000156IEA, ISSUniProtphosphorelay response regulator activity1 2 3 4
GO:0003700ISSUniProtsequence-specific DNA binding transcription factor activity1 2 3 4
GO:0005515IPIGene Ontologyprotein binding1
GO:0003682IEAUniProtchromatin binding1 2 3
GO:0003677IEAUniProtDNA binding1 2 3

Cellular Component

GO termEvidence(s)ProviderDescriptionSource
GO:0005634IDA, ISM, UniProtnucleus1 2 3 4 5

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Experimental Evidence
Electronic Evidence
Computational Reviewed Evidence
GO Sources:   Primary     Orthology     Homology  
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InterPro Description
IPR011006CheY-like superfamily
IPR017930Myb domain
IPR009057Homeodomain-like
IPR001789Signal transduction response regulator, receiver domain
IPR001005SANT/Myb domain
IPR006447Myb domain, plants

Mapman id Description
27.3.66RNA.regulation of transcription.Psudo ARR transcription factor family
No SignalP domains detected for this gene.

Binding sites bound by this Transcription Factor

Binding siteNameDescriptionCounts
Matrix_97APRR2Not available320 genes in 10 species

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DatabaseType
PlnTFDBARR-B
PlantTFDBARR-B