PLAZA 3.0 Dicots gene overview : AT4G13780

Gene: AT4G13780 (Arabidopsis thaliana)

Overview

Gene Identifier: AT4G13780
Transcript Identifier: AT4G13780.1
Gene Type: Coding gene
Location: 4 : 7993366-7998433 : negative

Family

Gene family: HOM03D001051
(143 genes in 31 species)
specific family
Subfamily: ORTHO03D005692
(33 genes in 26 species)
specific family

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Descriptions

Description: methionine--tRNA ligase, putative / methionyl-tRNA synthetase, putative / MetRS, putative

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Identifiers

Identifier	Name
uniprot	Q9SVN5

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Biological Process

GO term	Evidence(s)	Provider	Description	Source
GO:0006431	IEA, ISS	UniProt	methionyl-tRNA aminoacylation	1 2 3
GO:0046686	IEP	UniProt	response to cadmium ion	1 2 3
GO:0006418	IEA	InterPro	tRNA aminoacylation for protein translation

Molecular Function

GO term	Evidence(s)	Provider	Description	Source
GO:0004825	IEA, ISS	UniProt	methionine-tRNA ligase activity	1 2 3
GO:0000049	IEA	UniProt	tRNA binding	1 2
GO:0000166	IEA	InterPro	nucleotide binding
GO:0005524	IEA	UniProt	ATP binding	1 2
GO:0004812	IEA	InterPro	aminoacyl-tRNA ligase activity

Cellular Component

GO term	Evidence(s)	Provider	Description	Source
GO:0005737	ISM, IEA	Gene Ontology	cytoplasm	1
GO:0005829	IDA, TAS,	UniProt	cytosol	1 2 3 4

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Experimental Evidence

Electronic Evidence

Computational Reviewed Evidence

InterPro	Description
IPR014758	Methionyl-tRNA synthetase
IPR023458	Methionine-tRNA ligase, type 1
IPR002547	tRNA-binding domain
IPR014729	Rossmann-like alpha/beta/alpha sandwich fold
IPR015413	Methionyl/Leucyl tRNA synthetase
IPR012340	Nucleic acid-binding, OB-fold
IPR009080	Aminoacyl-tRNA synthetase, class 1a, anticodon-binding
IPR001412	Aminoacyl-tRNA synthetase, class I, conserved site

Mapman id	Description
29.1.10	protein.aa activation.methionine-tRNA ligase

No SignalP domains detected for this gene.