Gene: AT4G04350 (Arabidopsis thaliana)

Overview top

Gene Identifier
AT4G04350
Transcript Identifier
AT4G04350.1
Gene Type
Coding gene
Location
4 : 2128129-2133030 : positive

Family

Gene family
HOM03D004787
(42 genes in 30 species)
specific family
Subfamily
ORTHO03D008774
(29 genes in 27 species)
specific family

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Descriptions

Description
tRNA synthetase class I (I, L, M and V) family protein
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Identifiers

Identifier Name
aliasEMB2369
aliasEMBRYO DEFECTIVE 2369

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Biological Process

GO termEvidence(s)ProviderDescriptionSource
GO:0006418ISS, IEAGene OntologytRNA aminoacylation for protein translation1
GO:0009793IMP, NAS, RCAGene Ontologyembryo development ending in seed dormancy1 2 3
GO:0006364RCAGene OntologyrRNA processing1
GO:0006399RCAGene OntologytRNA metabolic process1
GO:0009658RCAGene Ontologychloroplast organization1
GO:0010027RCAGene Ontologythylakoid membrane organization1
GO:0010103RCAGene Ontologystomatal complex morphogenesis1
GO:0010228RCAGene Ontologyvegetative to reproductive phase transition of meristem1
GO:0016226RCAGene Ontologyiron-sulfur cluster assembly1
GO:0016556RCAGene OntologymRNA modification1
GO:0048481RCAGene Ontologyovule development1
GO:0006429IEAInterProleucyl-tRNA aminoacylation

Molecular Function

GO termEvidence(s)ProviderDescriptionSource
GO:0004812ISS, IEAGene Ontologyaminoacyl-tRNA ligase activity1
GO:0005524ISS, IEAGene OntologyATP binding1
GO:0002161IEAInterProaminoacyl-tRNA editing activity
GO:0000166IEAInterPronucleotide binding
GO:0004823IEAInterProleucine-tRNA ligase activity

Cellular Component

GO termEvidence(s)ProviderDescriptionSource
GO:0005737ISMGene Ontologycytoplasm1
GO:0009507IDAGene Ontologychloroplast1
GO:0005739IDAGene Ontologymitochondrion1
GO:0009570IDAGene Ontologychloroplast stroma1

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Experimental Evidence
Electronic Evidence
Computational Reviewed Evidence
GO Sources:   Primary     Orthology     Homology  
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InterPro Description
IPR025709Leucyl-tRNA synthetase, editing domain
IPR002302Leucine-tRNA ligase, bacterial/mitochondrial
IPR014729Rossmann-like alpha/beta/alpha sandwich fold
IPR009008Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain
IPR002300Aminoacyl-tRNA synthetase, class Ia
IPR013155Valyl/Leucyl/Isoleucyl-tRNA synthetase, class I, anticodon-binding
IPR015413Methionyl/Leucyl tRNA synthetase
IPR001412Aminoacyl-tRNA synthetase, class I, conserved site
IPR009080Aminoacyl-tRNA synthetase, class 1a, anticodon-binding

Mapman id Description
29.1.4protein.aa activation.leucine-tRNA ligase
No SignalP domains detected for this gene.