Gene: AT3G63140 (Arabidopsis thaliana)

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Gene Identifier
AT3G63140
Transcript Identifier
AT3G63140.1
Gene Type
Coding gene
Location
3 : 23327006-23328620 : negative

Family

Gene family
HOM03D002469
(73 genes in 31 species)
specific family
Subfamily
ORTHO03D005155
(34 genes in 31 species)
specific family

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Descriptions

Description
chloroplast stem-loop binding protein of 41 kDa
Curated Summary
Encodes a protein with ribonuclease activity that is involved in plastid rRNA maturation.
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Identifiers

Identifier Name
aliasCSP41A
aliaschloroplast stem-loop binding protein of 41 kDa
uniprotQ9LYA9

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Biological Process

GO termEvidence(s)ProviderDescriptionSource
GO:0006364IGI, RCA, UniProtrRNA processing1 2 3 4 5 6 7 8 9 10 11 12 13
GO:0032544IMPUniProtplastid translation1 2 3 4 5 6 7 8 9 10 11 12
GO:0045727IMPUniProtpositive regulation of translation1 2 3 4 5 6 7 8 9 10 11 12
GO:0045893IMP, RCA, UniProtpositive regulation of transcription, DNA-dependent1 2 3 4 5 6 7 8 9 10 11 12 13
GO:0006098RCAGene Ontologypentose-phosphate shunt1
GO:0009637RCAGene Ontologyresponse to blue light1
GO:0009657RCAGene Ontologyplastid organization1
GO:0009965RCAGene Ontologyleaf morphogenesis1
GO:0010114RCAGene Ontologyresponse to red light1
GO:0010207RCAGene Ontologyphotosystem II assembly1
GO:0010218RCAGene Ontologyresponse to far red light1
GO:0015979RCAGene Ontologyphotosynthesis1
GO:0015995RCAGene Ontologychlorophyll biosynthetic process1
GO:0019684RCAGene Ontologyphotosynthesis, light reaction1
GO:0030154RCAGene Ontologycell differentiation1
GO:0009658ISSUniProtchloroplast organization1 2 3 4 5 6 7 8 9 10 11
GO:0007623ISSUniProtcircadian rhythm1 2 3 4 5 6 7 8 9 10 11
GO:0044237IEAPLAZA Homologycellular metabolic processHOM03D002469

Molecular Function

GO termEvidence(s)ProviderDescriptionSource
GO:0003729ISSGene OntologymRNA binding1
GO:0008266IDAUniProtpoly(U) RNA binding1 2 3 4 5 6 7 8 9 10 11 12
GO:0005515IPIGene Ontologyprotein binding1
GO:0019843IEAUniProtrRNA binding1 2 3 4 5 6 7 8 9 10 11
GO:0050662IEAPLAZA Homologycoenzyme bindingHOM03D002469
GO:0003824IEAPLAZA Homologycatalytic activityHOM03D002469

Cellular Component

GO termEvidence(s)ProviderDescriptionSource
GO:0009507IDA, ISMGene Ontologychloroplast1 2
GO:0009941IDAUniProtchloroplast envelope1 2 3 4 5 6 7 8 9 10 11 12
GO:0009570IDAGene Ontologychloroplast stroma1
GO:0010287IDAUniProtplastoglobule1 2 3 4 5 6 7 8 9 10 11 12
GO:0009579IDAGene Ontologythylakoid1
GO:0048046IDAUniProtapoplast1 2 3 4 5 6 7 8 9 10 11 12
GO:0009534IDAUniProtchloroplast thylakoid1 2 3 4 5 6 7 8 9 10 11 12
GO:0005840ISSUniProtribosome1 2 3 4 5 6 7 8 9 10 11
GO:0010319ISSUniProtstromule1 2 3 4 5 6 7 8 9 10 11

Color Legend

Experimental Evidence
Electronic Evidence
Computational Reviewed Evidence
GO Sources:   Primary     Orthology     Homology  
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InterPro Description
IPR016040NAD(P)-binding domain

Mapman id Description
27.3.99RNA.regulation of transcription.unclassified
No SignalP domains detected for this gene.