Gene: AT3G57080 (Arabidopsis thaliana)

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Gene Identifier
AT3G57080
Transcript Identifier
AT3G57080.1
Gene Type
Coding gene
Location
3 : 21125878-21127470 : positive

Family

Gene family
HOM03D001135
(135 genes in 31 species)
specific family
Subfamily
ORTHO03D009998
(27 genes in 25 species)
specific family
Duplication type
Block duplicate

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Descriptions

Description
Eukaryotic rpb5 RNA polymerase subunit family protein
Curated Summary
Non-catalytic subunit unique to Nuclear DNA-dependent RNA polymerase V; homologous to budding yeast RPB5.
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Identifiers

Identifier Name
aliasNRPE5
aliasRNA POLYMERASE II FIFTH LARGEST SUBUNIT, B
aliasRPB5B
uniprotQ9M1J2

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Biological Process

GO termEvidence(s)ProviderDescriptionSource
GO:0006351IEA, ISSUniProttranscription, DNA-templated1 2 3 4 5 6 7 8

Molecular Function

GO termEvidence(s)ProviderDescriptionSource
GO:0003677IEA, ISSUniProtDNA binding1 2 3 4 5 6 7 8
GO:0003899IEA, ISSUniProtDNA-directed RNA polymerase activity1 2 3 4 5 6 7 8
GO:0034062IEAPLAZA HomologyRNA polymerase activityHOM03D001135

Cellular Component

GO termEvidence(s)ProviderDescriptionSource
GO:0005634ISM, IEAGene Ontologynucleus1
GO:0000419IDA, IPIUniProtDNA-directed RNA polymerase V complex1 2 3 4 5 6 7 8

Color Legend

Experimental Evidence
Electronic Evidence
Computational Reviewed Evidence
GO Sources:   Primary     Orthology     Homology  
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InterPro Description
IPR000783RNA polymerase, subunit H/Rpb5 C-terminal
IPR005571RNA polymerase, Rpb5, N-terminal

Mapman id Description
27.2RNA.transcription
No SignalP domains detected for this gene.