PLAZA 3.0 Dicots gene overview : AT3G56150

Gene: AT3G56150 (Arabidopsis thaliana)

Overview

Gene Identifier: AT3G56150
Transcript Identifier: AT3G56150.1
Gene Type: Coding gene
Location: 3 : 20833790-20836820 : negative

Family

Gene family: HOM03D002079
(82 genes in 31 species)
specific family
Subfamily: ORTHO03D001041
(59 genes in 31 species)
specific family

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Descriptions

Description: eukaryotic translation initiation factor 3C

Curated Summary: member of eIF3c - eukaryotic initiation factor 3c

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Identifiers

Identifier	Name
alias	TIF3C1
alias	EIF3C-1
alias	eukaryotic translation initiation factor 3C
alias	EIF3C
alias	ATTIF3C1
alias	ATEIF3C-1
uniprot	O49160

Toolbox

Explore

...the colinearity of this gene with other genomes.
...the local gene organization for homologous genes.
...the phylogenetic tree of the homologous gene family.
...the orthologs using the Integrative Orthology Viewer.
...the conserved binding sites (upstream/downstream,intron)

View

Biological Process

GO term	Evidence(s)	Provider	Description	Source
GO:0006413	IEA	InterPro	translational initiation
GO:0001731	IEA	UniProt	formation of translation preinitiation complex	1 2 3 4 5
GO:0006446	IEA	UniProt	regulation of translational initiation	1 2 3 4 5

Molecular Function

GO term	Evidence(s)	Provider	Description	Source
GO:0003743	IEA, ISS	UniProt	translation initiation factor activity	1 2 3 4 5 6
GO:0005515	IPI, IEA	Gene Ontology	protein binding	1
GO:0003723	IEA	InterPro	RNA binding
GO:0031369	IEA	InterPro	translation initiation factor binding

Cellular Component

GO term	Evidence(s)	Provider	Description	Source
GO:0005737	ISM	Gene Ontology	cytoplasm	1
GO:0005634	IDA	UniProt	nucleus	1 2 3 4 5 6
GO:0005829	IDA	UniProt	cytosol	1 2 3 4 5 6
GO:0005852	IEA	UniProt	eukaryotic translation initiation factor 3 complex	1 2 3 4 5
GO:0016282	IEA	UniProt	eukaryotic 43S preinitiation complex	1 2 3 4 5
GO:0033290	IEA	UniProt	eukaryotic 48S preinitiation complex	1 2 3 4 5

Color Legend

Experimental Evidence

Electronic Evidence

Computational Reviewed Evidence

InterPro	Description
IPR008905	Eukaryotic translation initiation factor 3 subunit C, N-terminal domain
IPR011991	Winged helix-turn-helix DNA-binding domain
IPR027516	Eukaryotic translation initiation factor 3 subunit C
IPR000717	Proteasome component (PCI) domain

Mapman id	Description
29.2.3	protein.synthesis.initiation

No SignalP domains detected for this gene.