Gene: AT3G54670 (Arabidopsis thaliana)

Overview top

Gene Identifier
AT3G54670
Transcript Identifier
AT3G54670.3
Gene Type
Coding gene
Location
3 : 20235818-20243701 : positive

Family

Gene family
HOM03D004119
(46 genes in 30 species)
specific family
Subfamily
ORTHO03D006522
(32 genes in 27 species)
specific family

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Descriptions

Description
Structural maintenance of chromosomes (SMC) family protein
Curated Summary
Encodes a member of the Arabidopsis cohesin complex that is essential for viability and sister chromatid alignment.
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Identifiers

Identifier Name
aliasATSMC1
aliasSTRUCTURAL MAINTENANCE OF CHROMOSOMES 1
aliasTITAN8
aliasSMC1
aliasTTN8
uniprotQ6Q1P4

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Biological Process

GO termEvidence(s)ProviderDescriptionSource
GO:0007059IMP, ISSUniProtchromosome segregation1 2 3 4 5 6
GO:0007062IEA, IMPUniProtsister chromatid cohesion1 2 3 4 5 6
GO:0000278RCAGene Ontologymitotic cell cycle1
GO:0006346RCAGene Ontologymethylation-dependent chromatin silencing1
GO:0006396RCAGene OntologyRNA processing1
GO:0009630RCAGene Ontologygravitropism1
GO:0009855RCAGene Ontologydetermination of bilateral symmetry1
GO:0009887RCAGene Ontologyorgan morphogenesis1
GO:0009888RCAGene Ontologytissue development1
GO:0010014RCAGene Ontologymeristem initiation1
GO:0010073RCAGene Ontologymeristem maintenance1
GO:0010413RCAGene Ontologyglucuronoxylan metabolic process1
GO:0010638RCAGene Ontologypositive regulation of organelle organization1
GO:0016246RCAGene OntologyRNA interference1
GO:0033044RCAGene Ontologyregulation of chromosome organization1
GO:0045492RCAGene Ontologyxylan biosynthetic process1
GO:0045893RCAGene Ontologypositive regulation of transcription, DNA-dependent1
GO:0051276IEAInterProchromosome organization
GO:0051301IEAUniProtcell division1 2 3 4 5
GO:0030261IEAUniProtchromosome condensation1 2 3 4 5
GO:0006310IEAUniProtDNA recombination1 2 3 4 5
GO:0006281IEAUniProtDNA repair1 2 3 4 5
GO:0007126IEAUniProtmeiosis1 2 3 4 5
GO:0007067IEAUniProtmitosis1 2 3 4 5

Molecular Function

GO termEvidence(s)ProviderDescriptionSource
GO:0005215ISSGene Ontologytransporter activity1
GO:0005524IEA, ISSUniProtATP binding1 2 3 4 5 6
GO:0005515IEAInterProprotein binding

Cellular Component

GO termEvidence(s)ProviderDescriptionSource
GO:0005634IEA, ISM, ISSUniProtnucleus1 2 3 4 5 6 7
GO:0008278ISSGene Ontologycohesin complex1
GO:0009507IDAGene Ontologychloroplast1
GO:0005694IEAUniProtchromosome1 2 3 4 5

Color Legend

Experimental Evidence
Electronic Evidence
Computational Reviewed Evidence
GO Sources:   Primary     Orthology     Homology  
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InterPro Description
IPR010935SMCs flexible hinge
IPR027417P-loop containing nucleoside triphosphate hydrolase
IPR003395RecF/RecN/SMC, N-terminal

Mapman id Description
31.2cell.division
No SignalP domains detected for this gene.