Gene: AT3G54320 (Arabidopsis thaliana)

Overview top

Gene Identifier
AT3G54320
Transcript Identifier
AT3G54320.1
Gene Type
Coding gene
Location
3 : 20114809-20118599 : positive

Family

Gene family
HOM03D000142
(728 genes in 31 species)
specific family
Subfamily
ORTHO03D008011
(30 genes in 24 species)
specific family

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Descriptions

Description
Integrase-type DNA-binding superfamily protein
Curated Summary
WRINKLED1 encodes transcription factor of the AP2/ERWEBP class. Protein has two plant-specific (AP2/EREB) DNA-binding domains and is involved in the control of storage compound biosynthesis in Arabidopsis. Mutants have wrinkled seed phenotype, due to a defect in the incorporation of sucrose and glucose into triacylglycerols. Transgenic sGsL plants (21-day-old) grown on 6% sucrose for 24 hours had 2-fold increase in levels of expressions (sGsL line carries a single copy of T-DNA containing the Spomin::GUS-Spomin::LUC dual reporter genes in the upper arm of chromosome 5 of ecotype Col-0. The sporamin .minimal. promoter directs sugar-inducible expression of the LUC and GUS reporters in leaves). Regulation by LEC2 promotes fatty acid accumulation during seed maturation.
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Identifiers

Identifier Name
aliasWRINKLED 1
aliasWRI1
aliasATWRI1
aliasASML1
aliasWRINKLED
aliasWRI
aliasACTIVATOR OF SPO(MIN)::LUC1
uniprotQ6X5Y6

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Biological Process

GO termEvidence(s)ProviderDescriptionSource
GO:0006355ISS, IEAGene Ontologyregulation of transcription, DNA-dependent1
GO:0019432IMPUniProttriglyceride biosynthetic process1 2 3 4 5 6 7 8 9
GO:0009744IEPUniProtresponse to sucrose1 2 3 4 5 6 7 8 9
GO:0006110IMPUniProtregulation of glycolysis1 2 3 4 5 6 7 8 9
GO:0006629IMPGene Ontologylipid metabolic process1
GO:1901959IGIUniProtpositive regulation of cutin biosynthetic process1 2 3 4 5 6 7 8 9
GO:0006109IMPGene Ontologyregulation of carbohydrate metabolic process1
GO:0008610IMPGene Ontologylipid biosynthetic process1
GO:0009873IEAUniProtethylene mediated signaling pathway1 2 3 4 5 6 7 8
GO:0006351IEAUniProttranscription, DNA-templated1 2 3 4 5 6 7 8
GO:0010468IEAPLAZA Homologyregulation of gene expressionHOM03D000142
GO:0006807IEAPLAZA Homologynitrogen compound metabolic processHOM03D000142
GO:0010467IEAPLAZA Homologygene expressionHOM03D000142
GO:0051252IEAPLAZA Homologyregulation of RNA metabolic processHOM03D000142
GO:0051171IEAPLAZA Homologyregulation of nitrogen compound metabolic processHOM03D000142
GO:0044260IEAPLAZA Homologycellular macromolecule metabolic processHOM03D000142
GO:0019222IEAPLAZA Homologyregulation of metabolic processHOM03D000142
GO:0019219IEAPLAZA Homologyregulation of nucleobase-containing compound metabolic processHOM03D000142
GO:0034641IEAPLAZA Homologycellular nitrogen compound metabolic processHOM03D000142
GO:0034645IEAPLAZA Homologycellular macromolecule biosynthetic processHOM03D000142
GO:0050789IEAPLAZA Homologyregulation of biological processHOM03D000142
GO:0009889IEAPLAZA Homologyregulation of biosynthetic processHOM03D000142
GO:0018130IEAPLAZA Homologyheterocycle biosynthetic processHOM03D000142
GO:0019438IEAPLAZA Homologyaromatic compound biosynthetic processHOM03D000142
GO:0043170IEAPLAZA Homologymacromolecule metabolic processHOM03D000142
GO:0046483IEAPLAZA Homologyheterocycle metabolic processHOM03D000142
GO:0016070IEAPLAZA HomologyRNA metabolic processHOM03D000142
GO:0009987IEAPLAZA Homologycellular processHOM03D000142
GO:0044271IEAPLAZA Homologycellular nitrogen compound biosynthetic processHOM03D000142
GO:0065007IEAPLAZA Homologybiological regulationHOM03D000142
GO:0010556IEAPLAZA Homologyregulation of macromolecule biosynthetic processHOM03D000142
GO:0006139IEAPLAZA Homologynucleobase-containing compound metabolic processHOM03D000142
GO:0032774IEAPLAZA HomologyRNA biosynthetic processHOM03D000142
GO:0006725IEAPLAZA Homologycellular aromatic compound metabolic processHOM03D000142
GO:1901576IEAPLAZA Homologyorganic substance biosynthetic processHOM03D000142
GO:0090304IEAPLAZA Homologynucleic acid metabolic processHOM03D000142
GO:0080090IEAPLAZA Homologyregulation of primary metabolic processHOM03D000142
GO:2001141IEAPLAZA Homologyregulation of RNA biosynthetic processHOM03D000142
GO:0044237IEAPLAZA Homologycellular metabolic processHOM03D000142
GO:0044238IEAPLAZA Homologyprimary metabolic processHOM03D000142
GO:0009058IEAPLAZA Homologybiosynthetic processHOM03D000142
GO:0009059IEAPLAZA Homologymacromolecule biosynthetic processHOM03D000142
GO:2000112IEAPLAZA Homologyregulation of cellular macromolecule biosynthetic processHOM03D000142
GO:0060255IEAPLAZA Homologyregulation of macromolecule metabolic processHOM03D000142
GO:0031323IEAPLAZA Homologyregulation of cellular metabolic processHOM03D000142
GO:0031326IEAPLAZA Homologyregulation of cellular biosynthetic processHOM03D000142
GO:1901360IEAPLAZA Homologyorganic cyclic compound metabolic processHOM03D000142
GO:1901362IEAPLAZA Homologyorganic cyclic compound biosynthetic processHOM03D000142
GO:0034654IEAPLAZA Homologynucleobase-containing compound biosynthetic processHOM03D000142
GO:0050794IEAPLAZA Homologyregulation of cellular processHOM03D000142
GO:0008152IEAPLAZA Homologymetabolic processHOM03D000142
GO:0071704IEAPLAZA Homologyorganic substance metabolic processHOM03D000142
GO:0044249IEAPLAZA Homologycellular biosynthetic processHOM03D000142

Molecular Function

GO termEvidence(s)ProviderDescriptionSource
GO:0003677IDA, ISSIEA, UniProtDNA binding1 2 3 4 5 6 7 8 9 10
GO:0003700IEA, ISSUniProtsequence-specific DNA binding transcription factor activity1 2 3 4 5 6 7 8 9
GO:0097159IEAPLAZA Homologyorganic cyclic compound bindingHOM03D000142
GO:0003676IEAPLAZA Homologynucleic acid bindingHOM03D000142
GO:1901363IEAPLAZA Homologyheterocyclic compound bindingHOM03D000142
GO:0001071IEAPLAZA Homologynucleic acid binding transcription factor activityHOM03D000142

Cellular Component

GO termEvidence(s)ProviderDescriptionSource
GO:0005634IEA, IC, ISMUniProtnucleus1 2 3 4 5 6 7 8 9 10

Color Legend

Experimental Evidence
Electronic Evidence
Computational Reviewed Evidence
GO Sources:   Primary     Orthology     Homology  
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InterPro Description
IPR016177DNA-binding domain
IPR001471AP2/ERF domain

Mapman id Description
33.99development.unspecified
No SignalP domains detected for this gene.

Binding sites bound by this Transcription Factor

Binding siteNameDescriptionCounts
Matrix_189WRI1An AP2-type transcription factor, WRINKLED1, of Arabidopsis thaliana binds to the AW-box sequence conserved among proximal upstream regions of genes involved in fatty acid synthesis467 genes in 10 species
Matrix_250ADAP;AT1G79700;WRI1;ANTNot available1055 genes in 10 species

View full overview
DatabaseType
PlnTFDBAP2-EREBP
PlantTFDBAP2