Gene: AT3G54280 (Arabidopsis thaliana)

Overview top

Gene Identifier
AT3G54280
Transcript Identifier
AT3G54280.2
Gene Type
Coding gene
Location
3 : 20092361-20104153 : positive

Family

Gene family
HOM03D000113
(850 genes in 31 species)
specific family
Subfamily
ORTHO03D011637
(22 genes in 20 species)
specific family
Duplication type
Block duplicate

Loading...please wait

Descriptions

Description
DNA binding;ATP binding;nucleic acid binding;binding;helicases;ATP binding;DNA binding;helicases
Show more...

Identifiers

Identifier Name
aliasCHR16
aliasROOT GROWTH DEFECTIVE 3
aliasRGD3
aliasATBTAF1
aliasCHA16
aliasBTAF1
uniprotB5BT18

Toolbox

Explore

View

 

Biological Process

GO termEvidence(s)ProviderDescriptionSource
GO:0009630RCAGene Ontologygravitropism1
GO:1902185IMPUniProtpositive regulation of shoot apical meristem development1 2 3

Molecular Function

GO termEvidence(s)ProviderDescriptionSource
GO:0003677IEA, ISSUniProtDNA binding1 2 3 4
GO:0004386IEA, ISSUniProthelicase activity1 2 3 4
GO:0005524IEA, ISSUniProtATP binding1 2 3 4
GO:0005488IEAInterProbinding
GO:0003676IEAInterPronucleic acid binding
GO:0032555IEAPLAZA Homologypurine ribonucleotide bindingHOM03D000113
GO:0016817IEAPLAZA Homologyhydrolase activity, acting on acid anhydridesHOM03D000113
GO:0032553IEAPLAZA Homologyribonucleotide bindingHOM03D000113
GO:0043168IEAPLAZA Homologyanion bindingHOM03D000113
GO:0043167IEAPLAZA Homologyion bindingHOM03D000113
GO:0035639IEAPLAZA Homologypurine ribonucleoside triphosphate bindingHOM03D000113
GO:0097367IEAPLAZA Homologycarbohydrate derivative bindingHOM03D000113
GO:0016818IEAPLAZA Homologyhydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydridesHOM03D000113
GO:0032559IEAPLAZA Homologyadenyl ribonucleotide bindingHOM03D000113
GO:1901265IEAPLAZA Homologynucleoside phosphate bindingHOM03D000113
GO:0016462IEAPLAZA Homologypyrophosphatase activityHOM03D000113
GO:0000166IEAPLAZA Homologynucleotide bindingHOM03D000113
GO:0030554IEAPLAZA Homologyadenyl nucleotide bindingHOM03D000113
GO:0001882IEAPLAZA Homologynucleoside bindingHOM03D000113
GO:0097159IEAPLAZA Homologyorganic cyclic compound bindingHOM03D000113
GO:0017076IEAPLAZA Homologypurine nucleotide bindingHOM03D000113
GO:0017111IEAPLAZA Homologynucleoside-triphosphatase activityHOM03D000113
GO:0036094IEAPLAZA Homologysmall molecule bindingHOM03D000113
GO:0032549IEAPLAZA Homologyribonucleoside bindingHOM03D000113
GO:0016787IEAPLAZA Homologyhydrolase activityHOM03D000113
GO:1901363IEAPLAZA Homologyheterocyclic compound bindingHOM03D000113
GO:0001883IEAPLAZA Homologypurine nucleoside bindingHOM03D000113
GO:0032550IEAPLAZA Homologypurine ribonucleoside bindingHOM03D000113

Cellular Component

GO termEvidence(s)ProviderDescriptionSource
GO:0005634IEA, ISMUniProtnucleus1 2 3 4

Color Legend

Experimental Evidence
Electronic Evidence
Computational Reviewed Evidence
GO Sources:   Primary     Orthology     Homology  
Show redundant parents:  
 
InterPro Description
IPR011989Armadillo-like helical
IPR016024Armadillo-type fold
IPR014001Helicase, superfamily 1/2, ATP-binding domain
IPR001650Helicase, C-terminal
IPR000330SNF2-related
IPR027417P-loop containing nucleoside triphosphate hydrolase
IPR022707Domain of unknown function DUF3535

Mapman id Description
27.3.44RNA.regulation of transcription.Chromatin Remodeling Factors
No SignalP domains detected for this gene.