Gene: AT3G53900 (Arabidopsis thaliana)
Overview 
- Gene Identifier
- AT3G53900
- Transcript Identifier
- AT3G53900.2
- Gene Type
- Coding gene
- Location
- 3 : 19956914-19959006 : negative
Family
- Gene family
- Subfamily
Descriptions
- Description
-
uracil phosphoribosyltransferase
- Curated Summary
-
Encodes UPP, a plastidial uracil phosphoribosyltransferase (UPRT) involved in uracil salvage. Loss-of-function mutation causes dramatic growth retardation, a pale-green to albino phenotype, abnormal root morphology and chloroplastic disorders.
Identifiers
Identifier | Name |
---|---|
alias | UPP |
alias | PYRIMIDINE R |
alias | uracil phosphoribosyltransferase |
alias | PYRR |
uniprot | Q9M336 |
Toolbox
Explore
- ...the colinearity of this gene with other genomes.
- ...the local gene organization for homologous genes.
- ...the phylogenetic tree of the homologous gene family.
- ...the orthologs using the Integrative Orthology Viewer.
- ...the conserved binding sites (upstream/downstream,intron)
View
Biological Process
GO term | Evidence(s) | Provider | Description | Source |
---|---|---|---|---|
GO:0009116 | ISS | Gene Ontology | nucleoside metabolic process | 1 |
GO:0016036 | IEP | UniProt | cellular response to phosphate starvation | 1 2 3 4 5 |
GO:0032502 | IMP | UniProt | developmental process | 1 2 3 4 5 |
GO:0006223 | IEA | UniProt | uracil salvage | 1 2 3 4 |
GO:0044206 | IEA | UniProt | UMP salvage | 1 2 3 4 |
Molecular Function
GO term | Evidence(s) | Provider | Description | Source |
---|---|---|---|---|
GO:0004845 | IMP, ISSIEA, | UniProt | uracil phosphoribosyltransferase activity | 1 2 3 4 5 6 |
GO:0005525 | IEA | UniProt | GTP binding | 1 2 3 4 |
Cellular Component
GO term | Evidence(s) | Provider | Description | Source |
---|---|---|---|---|
GO:0009507 | IDA, ISM | Gene Ontology | chloroplast | 1 2 |
GO:0009536 | IDA | Gene Ontology | plastid | 1 |
GO:0009570 | IDA | UniProt | chloroplast stroma | 1 2 3 4 5 |
GO:0005829 | IDA | UniProt | cytosol | 1 2 3 4 5 |
Color Legend
Experimental Evidence |
Electronic Evidence |
Computational Reviewed Evidence |
Mapman id | Description |
---|---|
23.3.1.3 | nucleotide metabolism.salvage.phosphoribosyltransferases.upp |
No SignalP domains detected for this gene.