Gene: AT3G49960 (Arabidopsis thaliana)

Overview top

Gene Identifier
AT3G49960
Transcript Identifier
AT3G49960.1
Gene Type
Coding gene
Location
3 : 18524313-18525610 : negative

Family

Gene family
HOM03D000014
(2794 genes in 31 species)
specific family
Subfamily
ORTHO03D001195
(55 genes in 27 species)
specific family
Duplication type
Block duplicate

Loading...please wait

Descriptions

Description
Peroxidase superfamily protein
Curated Summary
Its expression is enriched in root hair cells (compared to non-root hair cells) and this enrichment is associated with increase in the transcription-associated mark trimethylation of H3 lysine 4 (H3K4me3) and decrease in the Polycomb silencing-associated mark trimethylation of H3 lysine 27 (H3K27me3) in root hair cells relative to non-root hair cells.
Show more...

Identifiers

Identifier Name
uniprotQ96510

Toolbox

Explore

View

 

Biological Process

GO termEvidence(s)ProviderDescriptionSource
GO:0010054RCAGene Ontologytrichoblast differentiation1
GO:0006979IEAInterProresponse to oxidative stress
GO:0055114IEAInterProoxidation-reduction process
GO:0042744IEAUniProthydrogen peroxide catabolic process1 2 3 4
GO:0009651ISOPLAZA Tree-based Orthologyresponse to salt stressAT4G37530
GO:0044699IEAPLAZA Homologysingle-organism processHOM03D000014
GO:0006950IEAPLAZA Homologyresponse to stressHOM03D000014
GO:0044710IEAPLAZA Homologysingle-organism metabolic processHOM03D000014
GO:0008152IEAPLAZA Homologymetabolic processHOM03D000014
GO:0050896IEAPLAZA Homologyresponse to stimulusHOM03D000014

Molecular Function

GO termEvidence(s)ProviderDescriptionSource
GO:0004601IEA, ISSUniProtperoxidase activity1 2 3 4 5
GO:0020037IEAUniProtheme binding1 2 3 4
GO:0046872IEAUniProtmetal ion binding1 2 3 4
GO:0005515ISOPLAZA Tree-based Orthologyprotein bindingAT4G37530 AT4G37520
GO:0016209IEAPLAZA Homologyantioxidant activityHOM03D000014
GO:0003824IEAPLAZA Homologycatalytic activityHOM03D000014
GO:0046906IEAPLAZA Homologytetrapyrrole bindingHOM03D000014
GO:0005488IEAPLAZA HomologybindingHOM03D000014
GO:1901363IEAPLAZA Homologyheterocyclic compound bindingHOM03D000014
GO:0016491IEAPLAZA Homologyoxidoreductase activityHOM03D000014
GO:0097159IEAPLAZA Homologyorganic cyclic compound bindingHOM03D000014
GO:0016684IEAPLAZA Homologyoxidoreductase activity, acting on peroxide as acceptorHOM03D000014

Cellular Component

GO termEvidence(s)ProviderDescriptionSource
GO:0005576IEA, ISMUniProtextracellular region1 2 3 4 5
GO:0005737ISOPLAZA Tree-based OrthologycytoplasmAT4G37520

Color Legend

Experimental Evidence
Electronic Evidence
Computational Reviewed Evidence
GO Sources:   Primary     Orthology     Homology  
Show redundant parents:  
 
InterPro Description
IPR000823Plant peroxidase
IPR019793Peroxidases heam-ligand binding site
IPR019794Peroxidase, active site
IPR002016Haem peroxidase, plant/fungal/bacterial
IPR010255Haem peroxidase

Mapman id Description
26.12misc.peroxidases
SignalP Description
SignalP-noTMSignal Peptide detected using noTM network