Gene: AT3G44600 (Arabidopsis thaliana)

Overview top

Gene Identifier
AT3G44600
Transcript Identifier
AT3G44600.1
Gene Type
Coding gene
Location
3 : 16165368-16169201 : negative

Family

Gene family
HOM03D000143
(727 genes in 31 species)
specific family
Subfamily
ORTHO03D007956
(30 genes in 26 species)
specific family
Duplication type
Block duplicate

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Descriptions

Description
cyclophilin71
Curated Summary
Cyclophilin71 is a WD40 domain cyclophilin, which functions in gene repression, organogenesis and meristem development. CYP71 physically interacts with histone H3.
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Identifiers

Identifier Name
aliasCYP71
aliasAtCYP71
aliascyclophilin 71

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Biological Process

GO termEvidence(s)ProviderDescriptionSource
GO:0006457ISS, IEAGene Ontologyprotein folding1
GO:0009909IMP, RCAGene Ontologyregulation of flower development1 2
GO:0009933IMP, RCAGene Ontologymeristem structural organization1 2
GO:0010082IMPGene Ontologyregulation of root meristem growth1
GO:0010305IMPGene Ontologyleaf vascular tissue pattern formation1
GO:0010338IMPGene Ontologyleaf formation1
GO:0010358IMPGene Ontologyleaf shaping1
GO:0031060IMPGene Ontologyregulation of histone methylation1
GO:0048440IMPGene Ontologycarpel development1
GO:0048443IMPGene Ontologystamen development1
GO:0048453IMP, RCAGene Ontologysepal formation1 2
GO:0000003RCAGene Ontologyreproduction1
GO:0000278RCAGene Ontologymitotic cell cycle1
GO:0003002RCAGene Ontologyregionalization1
GO:0006306RCAGene OntologyDNA methylation1
GO:0006310RCAGene OntologyDNA recombination1
GO:0006312RCAGene Ontologymitotic recombination1
GO:0006325RCAGene Ontologychromatin organization1
GO:0006355RCAGene Ontologyregulation of transcription, DNA-dependent1
GO:0006396RCAGene OntologyRNA processing1
GO:0006406RCAGene OntologymRNA export from nucleus1
GO:0006606RCAGene Ontologyprotein import into nucleus1
GO:0007126RCAGene Ontologymeiosis1
GO:0007131RCAGene Ontologyreciprocal meiotic recombination1
GO:0007155RCAGene Ontologycell adhesion1
GO:0009560RCAGene Ontologyembryo sac egg cell differentiation1
GO:0009640RCAGene Ontologyphotomorphogenesis1
GO:0009793RCAGene Ontologyembryo development ending in seed dormancy1
GO:0009845RCAGene Ontologyseed germination1
GO:0009855RCAGene Ontologydetermination of bilateral symmetry1
GO:0009887RCAGene Ontologyorgan morphogenesis1
GO:0009888RCAGene Ontologytissue development1
GO:0010014RCAGene Ontologymeristem initiation1
GO:0010073RCAGene Ontologymeristem maintenance1
GO:0010074RCAGene Ontologymaintenance of meristem identity1
GO:0010090RCAGene Ontologytrichome morphogenesis1
GO:0010162RCAGene Ontologyseed dormancy process1
GO:0010182RCAGene Ontologysugar mediated signaling pathway1
GO:0010228RCAGene Ontologyvegetative to reproductive phase transition of meristem1
GO:0010332RCAGene Ontologyresponse to gamma radiation1
GO:0010388RCAGene Ontologycullin deneddylation1
GO:0010638RCAGene Ontologypositive regulation of organelle organization1
GO:0016567RCAGene Ontologyprotein ubiquitination1
GO:0016570RCAGene Ontologyhistone modification1
GO:0016571RCAGene Ontologyhistone methylation1
GO:0016579RCAGene Ontologyprotein deubiquitination1
GO:0019915RCAGene Ontologylipid storage1
GO:0031047RCAGene Ontologygene silencing by RNA1
GO:0032204RCAGene Ontologyregulation of telomere maintenance1
GO:0033043RCAGene Ontologyregulation of organelle organization1
GO:0033044RCAGene Ontologyregulation of chromosome organization1
GO:0043247RCAGene Ontologytelomere maintenance in response to DNA damage1
GO:0043687RCAGene Ontologypost-translational protein modification1
GO:0045010RCAGene Ontologyactin nucleation1
GO:0045893RCAGene Ontologypositive regulation of transcription, DNA-dependent1
GO:0048449RCAGene Ontologyfloral organ formation1
GO:0048451RCAGene Ontologypetal formation1
GO:0048765RCAGene Ontologyroot hair cell differentiation1
GO:0050826RCAGene Ontologyresponse to freezing1
GO:0051567RCAGene Ontologyhistone H3-K9 methylation1
GO:0071555RCAGene Ontologycell wall organization1
GO:0009987IEAPLAZA Homologycellular processHOM03D000143
GO:0044260IEAPLAZA Homologycellular macromolecule metabolic processHOM03D000143
GO:0008152IEAPLAZA Homologymetabolic processHOM03D000143
GO:0071704IEAPLAZA Homologyorganic substance metabolic processHOM03D000143
GO:0044267IEAPLAZA Homologycellular protein metabolic processHOM03D000143
GO:0043170IEAPLAZA Homologymacromolecule metabolic processHOM03D000143
GO:0019538IEAPLAZA Homologyprotein metabolic processHOM03D000143
GO:0044237IEAPLAZA Homologycellular metabolic processHOM03D000143
GO:0044238IEAPLAZA Homologyprimary metabolic processHOM03D000143

Molecular Function

GO termEvidence(s)ProviderDescriptionSource
GO:0003755ISS, IEAGene Ontologypeptidyl-prolyl cis-trans isomerase activity1
GO:0003682IDAGene Ontologychromatin binding1
GO:0042393IDAGene Ontologyhistone binding1
GO:0005515IEAInterProprotein binding
GO:0003824IEAPLAZA Homologycatalytic activityHOM03D000143
GO:0016853IEAPLAZA Homologyisomerase activityHOM03D000143
GO:0016859IEAPLAZA Homologycis-trans isomerase activityHOM03D000143

Cellular Component

GO termEvidence(s)ProviderDescriptionSource
GO:0005634IDA, ISMGene Ontologynucleus1 2
GO:0080008ISSGene OntologyCul4-RING ubiquitin ligase complex1

Color Legend

Experimental Evidence
Electronic Evidence
Computational Reviewed Evidence
GO Sources:   Primary     Orthology     Homology  
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InterPro Description
IPR001680WD40 repeat
IPR002130Cyclophilin-like peptidyl-prolyl cis-trans isomerase domain
IPR017986WD40-repeat-containing domain
IPR015943WD40/YVTN repeat-like-containing domain

Mapman id Description
35.2not assigned.unknown
No SignalP domains detected for this gene.