Gene: AT3G29360 (Arabidopsis thaliana)

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Gene Identifier
AT3G29360
Transcript Identifier
AT3G29360.1
Gene Type
Coding gene
Location
3 : 11267375-11268817 : negative

Family

Gene family
HOM03D000936
(156 genes in 31 species)
specific family
Subfamily
ORTHO03D000313
(103 genes in 29 species)
specific family
Duplication type
Block duplicate

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Descriptions

Description
UDP-glucose 6-dehydrogenase family protein
Curated Summary
Encodes one of four UDP-glucose dehydrogenase UGD) genes. Mutation of this gene in combination with UGD3 leads to swollen plant cell walls and severe developmental defects associated with changes in pectic polysaccharides.
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Identifiers

Identifier Name
aliasUDP-glucose dehydrogenase 2
aliasUGD2
uniprotQ9LIA8

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Biological Process

GO termEvidence(s)ProviderDescriptionSource
GO:0006065IDAUniProtUDP-glucuronate biosynthetic process1 2 3 4 5 6 7 8 9 10
GO:0005975IGIGene Ontologycarbohydrate metabolic process1
GO:0052546IGIUniProtcell wall pectin metabolic process1 2 3 4 5 6 7 8 9 10
GO:0006007RCAGene Ontologyglucose catabolic process1
GO:0007030RCAGene OntologyGolgi organization1
GO:0007033RCAGene Ontologyvacuole organization1
GO:0048767RCAGene Ontologyroot hair elongation1
GO:0055114IEAInterProoxidation-reduction process

Molecular Function

GO termEvidence(s)ProviderDescriptionSource
GO:0003979IDA, IGI, ISSIEA, UniProtUDP-glucose 6-dehydrogenase activity1 2 3 4 5 6 7 8 9 10 11 12
GO:0051287IEAUniProtNAD binding1 2 3 4 5 6 7 8 9
GO:0016616IEAInterProoxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor
GO:0016614IEAPLAZA Homologyoxidoreductase activity, acting on CH-OH group of donorsHOM03D000936

Cellular Component

GO termEvidence(s)ProviderDescriptionSource
GO:0005737ISMGene Ontologycytoplasm1
GO:0005634IDAUniProtnucleus1 2 3 4 5 6 7 8 9 10
GO:0005829IDAUniProtcytosol1 2 3 4 5 6 7 8 9 10

Color Legend

Experimental Evidence
Electronic Evidence
Computational Reviewed Evidence
GO Sources:   Primary     Orthology     Homology  
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InterPro Description
IPR014027UDP-glucose/GDP-mannose dehydrogenase, C-terminal
IPR017476UDP-glucose/GDP-mannose dehydrogenase
IPR016040NAD(P)-binding domain
IPR0089276-phosphogluconate dehydrogenase, C-terminal-like
IPR001732UDP-glucose/GDP-mannose dehydrogenase, N-terminal
IPR028356UDP-glucose 6-dehydrogenase, eukaryotic type
IPR014026UDP-glucose/GDP-mannose dehydrogenase, dimerisation

Mapman id Description
10.1.4cell wall.precursor synthesis.UGD
No SignalP domains detected for this gene.